Gene TDE1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1379 
Symbol 
ID2741140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1420104 
End bp1420748 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content39% 
IMG OID637160258 
Producthypothetical protein 
Protein accessionNP_971985 
Protein GI42526887 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACA CCTTAAAAGA CCTGAGATTT AAAGTCTGGA TAGCCTTTTT AACCTTCTTG 
TCGGGTTTTA TAAATGTAGG AGCAATCCGC AGCTTTTCTT TGCCTGTAAG CCATCATACA 
GGGAATGTAA GTCATCTTGC CCTTTCAATT GCAAACAAAA ATATAACGGA AGTTTTTATA 
ATCGGTTCAG CGATTCTTGC CTTTTTTGCG GGAGCCTTCA TATCAGGACT TTTATTCCAC 
CAAAGAAAAT TCGGATTAAA GAAAAGATAC GGAATCTTGC TGATGGGCCT GGCTATGATA 
TTTTTAAGTT TAGCACTGTT TAAAACACCC CAAATCCTCA AAGTATCTGC CCTAAGCTTC 
GCAGCAGGAG TTCAAAACGC CATGTTTATC TTCTATGGAG ATATCCTTGT AAGAACCACC 
CACATAACAG GCTACCTTAC AGATGCTGCC TTTGCCCTAG CTATGTGCCT TAGGGGCAAA 
AAAGACAAAT TCCGATTTTT TTTGTTTTAC AGCCTCAACA TTCTTTTTTT CTTAGCCGGA 
GGAATTACAG CAGGCCTTAT CAAAATCGGC TCATTTTTTA TAAGTTCTGC CTGTCTTTAT 
CTTATCGCCG GCCTTTACTA TTTTATGATG AGGAAAAAAC AGTAA
 
Protein sequence
MSNTLKDLRF KVWIAFLTFL SGFINVGAIR SFSLPVSHHT GNVSHLALSI ANKNITEVFI 
IGSAILAFFA GAFISGLLFH QRKFGLKKRY GILLMGLAMI FLSLALFKTP QILKVSALSF 
AAGVQNAMFI FYGDILVRTT HITGYLTDAA FALAMCLRGK KDKFRFFLFY SLNILFFLAG 
GITAGLIKIG SFFISSACLY LIAGLYYFMM RKKQ