| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1370 |
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| Symbol | |
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| ID | 2741131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1411884 |
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| End bp | 1413374 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637160249 |
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| Product | YjeF-related protein |
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| Protein accession | NP_971976 |
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| Protein GI | 42526878 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAATG TTTTTTATTC TTTAAGGGAA TTGGATAAAA GAGCCGAAGA AGATTTTAAT
TTAAAAAACG GAATCTTAAT GGAAAACGCA GCCCGCGGTT CAGCGGAAAA AATTAAAAAT
CTTTTTCCGT TAAAAAAAAG AGATGAAAAA AAAACTCTAC AGATTGTCTG CGGTTCGGGC
GACAACGGCG GAGACGGGCT CGCCCTTGCA AGAATCTTAG CCGATGATTT TAATATTCAT
GTTATAATTT TAAAGGAGCC GAAGTCTGAA TTATGTAAAC TACAATACGA AAGATTAAAA
GCCTTAAATA TAAGGACGGC TAAAAACATC TTGCCCGAAT CGGATATTCT TTTTGATGCA
TTTTTGGGCA CCGGCTTAAA AGGGCTTTTA AAAGCCGAGG ATAAAAAAAC AATAGAGAAG
ATAAATAAGG TCAAGGCCTT TAAGATAGCC TGCGATATAC CGAGCGGCTT AAACCTTGAT
GGAGAAGCAA GCCCCAATGC AGTTCTATGT AACATGACCT TTTCGATGGG AGCCTTAAAG
CAGGCCTTTT ATTCGGATGA GGCAAAAGAT ATTACGGGAA AAATCGAGGT CATAGACCTA
GGCCTCCCCC GCTCCTTATA CGAACAAAAC GAAAAGTCCA ATGTTTTTTT ACTCGAAAAA
GAAGATATGC TTCTCCCTTC AAGAAAAAAA CAAAACACCC ATAAGGGAAG TTTCGGTCAT
GCAGGAATAA TTGTAGGAGA AAAAAACGGG GCAGCACTTT TGGCAGCTTC TGCCGCCTTG
GAATTCGGTG CAGGCCTTGT AACATTGATA GGAGAAAATC GGGAAAGGCC TAAAAACCTA
AAAGCCGATT TTATGTATGA CGGCAAATTC GAAGCCGGCA AATTCAATGT TAAAAAATTT
ACAAGCATCG CAATAGGTCA AGGACTTGGA AGAAAAAATG ATGGACTTTT TTCTATCCTA
AAGGTGAAAG AAACACAATC AATGCCAATG GTTATAGATG CGGATATCTT TTATTATGCC
GAACTAAAAA AAATCTTACC CGAATTAAGT GCTGCCGTTT TAACCCCTCA CCCAAAAGAA
TTTTCTTCAC TTTTAAATAT TGCCGGTTTT GGAAGTTTAA GCATTGAAGA AATACAAAAA
AAACGCTTTA TCTTAGCCTT AAGTTTTTCA AAAAAATTCC CTAAGCTTGT GCTTGTGCTA
AAGGGAGCTA ATACCTTAAT AGCCCATAAC GGAAAAATAT GTATCAATAC TTTAGGCTCT
CCCTCTCTTT CAAAGGCGGG TTCAGGCGAT GTGCTGACAG GTCTTATATG CTCCCTCTTG
GCTCAGGGCT ATAAGCCTCT TGATGCTGCA ATTACGGGGA GCCTCGCCCA CAGCCTTGCT
TCTCAAAACT CAAGGGCAAG CTATAGCTTA ACGGCAAGTA AGCTCATTAA AAATTTGGAA
AAATTAGAAG CGGAGCAATT TAAAGAATCA AAGGCACGAC AGGTAAAATA A
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| Protein sequence | MQNVFYSLRE LDKRAEEDFN LKNGILMENA ARGSAEKIKN LFPLKKRDEK KTLQIVCGSG
DNGGDGLALA RILADDFNIH VIILKEPKSE LCKLQYERLK ALNIRTAKNI LPESDILFDA
FLGTGLKGLL KAEDKKTIEK INKVKAFKIA CDIPSGLNLD GEASPNAVLC NMTFSMGALK
QAFYSDEAKD ITGKIEVIDL GLPRSLYEQN EKSNVFLLEK EDMLLPSRKK QNTHKGSFGH
AGIIVGEKNG AALLAASAAL EFGAGLVTLI GENRERPKNL KADFMYDGKF EAGKFNVKKF
TSIAIGQGLG RKNDGLFSIL KVKETQSMPM VIDADIFYYA ELKKILPELS AAVLTPHPKE
FSSLLNIAGF GSLSIEEIQK KRFILALSFS KKFPKLVLVL KGANTLIAHN GKICINTLGS
PSLSKAGSGD VLTGLICSLL AQGYKPLDAA ITGSLAHSLA SQNSRASYSL TASKLIKNLE
KLEAEQFKES KARQVK
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