| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1343 |
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| Symbol | |
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| ID | 2741077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1380686 |
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| End bp | 1382296 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160221 |
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| Product | trypsin domain/PDZ domain-containing protein |
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| Protein accession | NP_971949 |
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| Protein GI | 42526851 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.937553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTATT CGGATAGATC CAGTGTATTG TATCAGGTTG ATTACGCAGA AAAACTCCTT
AAATCGGGTA AGATAACGGA TGCTTTAATC CGCTCCCGGA TTCTTCATCT TAACACAAAA
AATTTTGAAG AAGTGGACAA GATTAATTTA AAGTCGATAG AAAAAACGGA AGCCGCATTT
TTACAAAGCA TAGAGGAAAA AAATTGGGAT GAGGCTGTCA GGTATTTTAG GTCTCTTACC
TCAATTGGAA AACGCCCTGC CGGATGGACG GAGGAGCGGC TTTTTGAAGA GAGGAATATC
TTATGGAAAA AGAATGCCGA TCTTCCCTTA TTAAACTTAC AAAATAAAAA AAATCCTTCA
GCCGGTTCAG CTTCTTTTCC TCAAAATATA GATGAGATGA TAAAGGGCTC TCTTACCGTT
TGGGTGAATA GGGGAACACG CATACAAAGA GGTTATGCTT CGCCTGACAT TGTTATAGGT
TCGGGTTTTT TTATAGATTC CCGCGGTTAT TTTATTACGA ATTATCATGT TATTCAAAGC
GAGGTTGATA AAAAATATAA CGGCTATTCC AGACTTTATA TTAAGTCTCC CGATAATCCA
AATATAAAAA TCCCTGCAAG GGTTGTAGGC TGGGATCCTC TTTTTGATCT GGCCTTGGTA
AAGACCGAGT ACACGCCTCA GTTTATTTTT AATCTGGGCT CTTCAAAGGA TTTAGGAGTC
GGAAGCCGTA TTTATGCAAT CGGTTCTCCG GCAGGTTTGG AAAAAACCCT TACCTCAGGT
ATAGTATCGG CAAAATACCG ACGGCTTTTT TCTATGGTAG ATATAATGCA GATAGATGCT
GCCGTCAATC ATGGGAATTC GGGCGGACCG ATAGTGGATG ATAAGGGTCT TGTTCAAGCC
GTAGTATTTG CCGGTCTCGA AAGAAACGAG GGCCTTAATT TTGCAATCCC TGTTGAGCTT
TTAAAGGCTG TTCTTCCCGA TTTATATAAG GGCGGAGAAG TTAAGCATAC TTGGCTTGGC
TGTCACGGTC AAAACCAAAA AAGCGGCTCC GGTAATGCAG GCAGAGTTTC GGACGGGGTT
CTTGTAAACT ATGTTCTTCC TGACGGCCCT TTTTCAATTT CAGGTATAAA TGAGGGTACC
GTAATAAAAG AAGTTAACGG TATTCCGGTA AATTCGGTTG AAGAAATACA GGCCAATTTA
TTGTCTATAG CTCCTGAAAC TATAGTCCTC ATTAAAGGCT ATCAAAAAAA TGAAGCAGGT
GTTTATGAAG AAAAAACTTG GCCTGTTTTA TGTGCCGAAC GTCCTTTATA TCCGGGAAAT
TCCGTTTTTA GAAAGGACAG TATAGCAAGA TCCATGCTTC CCGTTTTCGG ATTTAAACTT
GAATCGGTGG GAAAAAAGAA TTCTTATAGG GTTGCAGAGG TTATCCCCGG AAGTTTTGCA
TCTGAAAATG CCTTTGGTGT AAATGACTAT ATTGAGATTA ACGGGAAAAG ATGGGATAAT
GAAAACGAAG AGATTATTCA TGTAAATATT TATACAAAAA AGGTTAGGGC AGGTTATATG
GACAGCTTTA TGGTTTTAAG TGCCTATCTT GATAATCCCC TTTTCTTTTA A
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| Protein sequence | MDYSDRSSVL YQVDYAEKLL KSGKITDALI RSRILHLNTK NFEEVDKINL KSIEKTEAAF
LQSIEEKNWD EAVRYFRSLT SIGKRPAGWT EERLFEERNI LWKKNADLPL LNLQNKKNPS
AGSASFPQNI DEMIKGSLTV WVNRGTRIQR GYASPDIVIG SGFFIDSRGY FITNYHVIQS
EVDKKYNGYS RLYIKSPDNP NIKIPARVVG WDPLFDLALV KTEYTPQFIF NLGSSKDLGV
GSRIYAIGSP AGLEKTLTSG IVSAKYRRLF SMVDIMQIDA AVNHGNSGGP IVDDKGLVQA
VVFAGLERNE GLNFAIPVEL LKAVLPDLYK GGEVKHTWLG CHGQNQKSGS GNAGRVSDGV
LVNYVLPDGP FSISGINEGT VIKEVNGIPV NSVEEIQANL LSIAPETIVL IKGYQKNEAG
VYEEKTWPVL CAERPLYPGN SVFRKDSIAR SMLPVFGFKL ESVGKKNSYR VAEVIPGSFA
SENAFGVNDY IEINGKRWDN ENEEIIHVNI YTKKVRAGYM DSFMVLSAYL DNPLFF
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