Gene TDE1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1324 
Symbol 
ID2741058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1361005 
End bp1361700 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content42% 
IMG OID637160201 
Producthypothetical protein 
Protein accessionNP_971930 
Protein GI42526832 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.311232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TATTTCTTAT TATTAGTTTG GTTTGCTTTA TGTTAACTCC GCTTTTGGCT 
ATTAGCGGTG AGGTTGTTGC AGTCAAGGGA AAGGCTGAAA TAAAGCAAGG CGGAAAATGG 
ATTCCTGCAA GGGCTGGAAA CAAAATAACA TCGGGACTTA TGATTTCGAC AGGGTTTAAA 
TCCGAACTGA CTTTAAAGAT TGACGGTTCC GTTATTACGG TTAAACCTAT GACAAGGCTT 
ACAATCGAAG AAATCGCCGA AAAGAATGAA ACCGTTTCTT CGGAAGTTTA CTTAAATGTA 
GGTTCCGTAA AGGCCGATGT AAAACCGGCT TCAACAAAAA AGGTTGAGTT TAAGGTAAAA 
ACACCTGTTG CAACAGCTTC CGTTCGCGGA ACATCGGGAG AGATCGGTTC TGACGGTCTT 
TTAATCGGAA CAAGCGGAAT ATGGTCGTAT GTAAACAATG ATGGAATTGA AACAAGGGTA 
AATATCGGCG ACTCTGTTAT TATAAGCGAT ACAGGGATGG TAACTCCGGC TCAAAATATC 
AAGGCTAATG AAGTTTTACC GGCATCAGTC GCAACTCTTG CAGAAGCGGA AGCCAATTCT 
CCTACGCTTA CCAACCAATC ACCCGGCATT GAAGACGCAA TAAATACGGC GGCTTCAGTT 
TCAACACTAT CTTTAAGTAT AGGCTGGAAA GACTAA
 
Protein sequence
MKKVFLIISL VCFMLTPLLA ISGEVVAVKG KAEIKQGGKW IPARAGNKIT SGLMISTGFK 
SELTLKIDGS VITVKPMTRL TIEEIAEKNE TVSSEVYLNV GSVKADVKPA STKKVEFKVK 
TPVATASVRG TSGEIGSDGL LIGTSGIWSY VNNDGIETRV NIGDSVIISD TGMVTPAQNI 
KANEVLPASV ATLAEAEANS PTLTNQSPGI EDAINTAASV STLSLSIGWK D