Gene TDE1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1297 
Symbol 
ID2741051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1333967 
End bp1334872 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content42% 
IMG OID637160174 
ProductLysM/M23/M37 peptidase 
Protein accessionNP_971903 
Protein GI42526805 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only 
COG ID[COG3858] Predicted glycosyl hydrolase
[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000265037 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AAAACATCTT AAGGCCTTTA TTTTTTATTT TGTTCTCATT TTTCTGCTTT 
GCAGAAGATA TCGTGCATAT AATCGAAAAA GGAGACACTC TTTATTCCAT TAGCAAAAAA
TATAATACGC CTATAGATTC TATTCTCAAA AAAAATAACT TAAGCGACCC TTCAAAAATA
AAGATAGGGC AAAAGCTCAT AATTCCGGTA GAAAGTTCTG CAAAAAACGA TAAAAAAACT
AATGCCAAGA CCGGTTCGGA GGAGATCACC CATGTGATAC AAAAAGGAGA TACTCTTTAT
GCCTTGGCAA AAAAATTCGG CGTCAAATTT TCCGATATCC TTAAACTAAA CGGACTTAAC
GAAAAAACGC CCTTAAAAAT AGGCCAAATT TTAAAAATCC CTCAAGGAAA ATCCCAAGGC
ACGGCCCAAG AGCAGGAGAG CAAAGCACCT CAAGACGGCA AACAAGAAAA AACCTCAATT
ACAAAGGCAG GCTCCGATAA GGAAACTCAG GCCGTAAAGC CGAGCACTTC TACAAAGCAA
GCCGATTCCA AGCTCCTTTG GCCCGTTCCG GCCTCAAAGG TTGCCTATCT TTCAGGAAAA
ATCACCGGAG TCGTTATAGA TTCGGTAAAG GGACAGGCCG TAAAGGCTGT AAGCTCAGGG
AAAGTCGTAT CCACAGGCCC TCACCGAGGC TTCGGTCAGG TCGTATTTGT TCAATCTAAG
ACAAAACACA TCTATGTTTA CGGCGGAATG GAGAAAATCG TCGTAAAAAA GGGAGATACA
ATCGCCGTAG GCCAAAAGCT GGGAGAGCTG GGAGTAGAAT TGCTCACAGG CAAAGCAAGG
CTCTACTTTA TGGTCTATGA TAAAAATAAG CCCATCGACC CTGCAAAGGC CCCGAGAGGC
CTCTAG
 
Protein sequence
MYKKNILRPL FFILFSFFCF AEDIVHIIEK GDTLYSISKK YNTPIDSILK KNNLSDPSKI 
KIGQKLIIPV ESSAKNDKKT NAKTGSEEIT HVIQKGDTLY ALAKKFGVKF SDILKLNGLN
EKTPLKIGQI LKIPQGKSQG TAQEQESKAP QDGKQEKTSI TKAGSDKETQ AVKPSTSTKQ
ADSKLLWPVP ASKVAYLSGK ITGVVIDSVK GQAVKAVSSG KVVSTGPHRG FGQVVFVQSK
TKHIYVYGGM EKIVVKKGDT IAVGQKLGEL GVELLTGKAR LYFMVYDKNK PIDPAKAPRG
L