Gene TDE1242 details

Gene Information

• Locus tag: TDE1242
• ID: 2741184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1274705
• End bp: 1275172
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637160120
• Product: putative metalloprotease
• Protein accession: NP_971849
• Protein GI: 42526751
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.33223
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAATT CGATTAGTGT GTCATTTAAT GATGAACCTC CGGGGTCTAT AGACCCCGTA 
AGAGTTGAAA ATTTTATATC TGAAGTCCTA AAAGATTTAA ACTTGAAAAA TTGGGATATC 
TCCTTGTTGT TTTGTGATGA TGCTTTTATT CAAAACCTTA ATAAACAATA CAGGGATATC 
GATTCGCCGA CAGATGTCCT TTCTTTTGAA CAGGGTGACG AATATTTTGA CGAGGCCGGT 
GAAACAAGGT TTATGGCCGG AGACATAGTT ATAAGCCTTG ACAGTCTCAG CTTTAATGCC 
GAAGAATTTA ACGTAGACAT AAATGAAGAG TTAAAAAGAC TGATTGTGCA CGGTATTTTG 
CATTTGAACG GAATGGATCA TTCGGATAAT TCTCCGGAAC AAGAAATGCT TAAATTTCAA 
GAAGAATTGC TTATGCAATA TAAAAATATG GAAATTTATC GGGTATAG 

 

Protein sequence

MSNSISVSFN DEPPGSIDPV RVENFISEVL KDLNLKNWDI SLLFCDDAFI QNLNKQYRDI 
DSPTDVLSFE QGDEYFDEAG ETRFMAGDIV ISLDSLSFNA EEFNVDINEE LKRLIVHGIL 
HLNGMDHSDN SPEQEMLKFQ EELLMQYKNM EIYRV