| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1217 |
|---|
| Symbol | fliH |
|---|
| ID | 2740111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1249651 |
|---|
| End bp | 1250577 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637160095 |
|---|
| Product | flagellar assembly protein H |
|---|
| Protein accession | NP_971824 |
|---|
| Protein GI | 42526726 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA CTATTTTTAG AGGCTTTGAG GTAAACAAAA ACAATAACGA TGTAGTGTTT
TTACAGCTTA ATAAAACTTT TCAAGAAGAA CCTGAAGAAA TTATTGAAGA AAAGGTTCCG
GTTTATGAAG GTCCGACTGT TGAAGATTTA AAAAAAGAAG CTGAGGATTT TAAACTCGAA
TGGGAAAAGC AAAAAGAAAA AATGATTTCC GATGCTAAAG CTGAAGCCGA TAAAATTATT
GAAGATGCTC AAAATGCAGC CTTTGATGAG GTAAAAAGGC AGACAGATGA AGCTCAAGTT
ATTGCTCAAA ATGCAAAAAA AGATGCTGAA GATATTATAG CCGAAGCCGA GCAAAAAGCC
AGAGATATAA TAGCCGATTC CGAAAAAAAC AAAGATTCCG TAAACCGTGA TGCTTATAAA
GAAGGTTTTA ATCGCGGCCG TGAAGAAGGT TTTAAAGAAG GAAATCTTGA AGTGCAACGC
CTAACCGATC GTCTTCATAC AATAATAAAT AAGACAATGG ATAGGCGCCA AGAAATTCTT
TCTGAAACCG AGCAGCAAAT AGTGGATCTT GTTCTTTTGA TGACAAGAAA GGTTGTTAAA
GTTATTTCCG AAAATCAGAG AAATGTTGTA GTTTCCAATG TTGTTCATGC TTTACGAAAA
GTAAAGGGCA GGGGTGATGT GGTTATACGA GTTAATCTTG CTGATGTTAA GATGACTACG
GAACACATTC AAAACTTCAT ATCCGCTGCA GAAAATATTA AAAATATTAC GGTGGTTGAA
GATTCTACTG TTGATCAAGG CGGATGTATC ATTGAAACGG ACTTCGGAGC AGTGGATGCA
CGTATAGCAA GTCAGCTTAA CGAACTTGAG CAAAAGATTT TGGAAATATC TCCTATTAAA
ACAAAGATAA AGACCGGAAA TATTTAA
|
|---|
| Protein sequence | MAKTIFRGFE VNKNNNDVVF LQLNKTFQEE PEEIIEEKVP VYEGPTVEDL KKEAEDFKLE
WEKQKEKMIS DAKAEADKII EDAQNAAFDE VKRQTDEAQV IAQNAKKDAE DIIAEAEQKA
RDIIADSEKN KDSVNRDAYK EGFNRGREEG FKEGNLEVQR LTDRLHTIIN KTMDRRQEIL
SETEQQIVDL VLLMTRKVVK VISENQRNVV VSNVVHALRK VKGRGDVVIR VNLADVKMTT
EHIQNFISAA ENIKNITVVE DSTVDQGGCI IETDFGAVDA RIASQLNELE QKILEISPIK
TKIKTGNI
|
|---|
| |