Gene TDE1183 details

Gene Information

• Locus tag: TDE1183
• ID: 2740080
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1210752
• End bp: 1211414
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637160058
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_971791
• Protein GI: 42526693
• COG category: [H] Coenzyme transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000113445
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACGCA ACGGCATCGG AAAAACCACC TTTATAAAAT GTCTTGCGGG AATTCTTACA 
TGGTCATCAG GGAGTTCTTT AATCATGGGA AAGCCTGTAG AAAAACGGAC AAACTTTTTA 
GGCTATGTTC CTCAGGCAAA GGTGCCTTCT TTTTCGTACA CGGTCCTTGA TTTTGTTTCG 
TTCGGAAGAA GTTCCGTAAA CGGGTACTTT GCTTCTCCGT CAAAAAAAGA TTATGAGGCA 
TCCCTTGCCG TTATGGAAGA ACTCGATATA GCCTTCTTAA AAAATCGTTT TTGTAATGAA 
ATAAGCGGAG GAGAATTACA ACTTGCCTAC ATTGCAAAGG CTCTTGTTTG TAAGCCCCGT 
ATTTTGATTC TTGATGAGCC GGAATCCAAT TTGGATTTTT ACAATCAAGG CCGGGTATTA 
AAAACGTTAA AAAAACTTTC ACGCCAAAAT AAAACTACAA TAATCATAAA TTCTCATCAC 
ATACAAAATA TGCTGATCAT TGCCGATAAG GGCTTATTGC TTTCGGAAGG CCACTTTTTG 
TTCGGCAGCA TTGATTTGCT TATTACAAAT GAAAACATAA AAACATTTTT TAACTCCGAT 
GTTTTTGTGC TACCCGTTTT GCATGAGGGA CAAAGTTTTA AAACATTTGT AGTAAAACTT 
TAG 

 

Protein sequence

MERNGIGKTT FIKCLAGILT WSSGSSLIMG KPVEKRTNFL GYVPQAKVPS FSYTVLDFVS 
FGRSSVNGYF ASPSKKDYEA SLAVMEELDI AFLKNRFCNE ISGGELQLAY IAKALVCKPR 
ILILDEPESN LDFYNQGRVL KTLKKLSRQN KTTIIINSHH IQNMLIIADK GLLLSEGHFL 
FGSIDLLITN ENIKTFFNSD VFVLPVLHEG QSFKTFVVKL