Gene TDE1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1180 
Symbol 
ID2740077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1209009 
End bp1209923 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content39% 
IMG OID637160055 
Productiron compound ABC transporter, periplasmic iron compound-binding protein 
Protein accessionNP_971788 
Protein GI42526690 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000254745 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA AATTATTTAT TATTTTGGGT TTCCTTTGTA TGAGTACCCT GCTGTTTGCA 
GGAGGAAGCA AGGAAGGCAG TACGAAACAG GAAAAAGGCC GTGAAATGTA CGGCTATATG 
GTTCCTGCAT CCGTTCCTCA AAGGACTGCT GTAGGACAGG TTGTTCTATT ACAGATGCTT 
GACATGCTTG ATGTCGATAT AGTTGCAAGA CCTTCGACAA AACGGGAAAT AAGTGCAAGG 
TATAAGGATA AAACGGAAAT CGGTATGCCG ATGCGCGTTG ATCTTGAAAA GCTTAAGGAA 
GTAAACCCCG ACTTTTATTT GGCAACCGGT GATAGGGGTG CACCTATTGC AGAACAATTA 
AAGGCTTTAA ATATCCCTGC GGAGTTTTTG CAGACTACAA CCTACACCGA TATTTTAAAT 
TCGATGAAGT ACTTAGGTGA GGTTTACAAC AAGCAAAAAG AAGCCGCAGC TTATGTAAAA 
GAAGTCGAAG ATGTGGTTGC AAAGGTTAAA GCTGCCAATA AAAATAAAAA ACCTCTTAAA 
GTTTTAATTA TTGCAGGTTT TCCCAACAGT ATGAGTATAC ATACGGAAGG TTCTTTTGTC 
GGCAGTTTAA TAAAGGTCTT AGGTGCGGAA AATATATGGA AGGACAATAC GGTAAAAAAT 
ACTACGGTTC CTATGAATCT GGAGCTGGTA AAGGCTTCCA ATCCCGATAT TATTTTGCTT 
ACCAGCCACG GTGATGCAAA AGATACTGCA AAAATGTACG AAAAAGAATT TCAAAGTGAT 
TTTTGGCAAA AAATTGATGC CGTTAAAAAT AAGAGATATT ATAGTTTGGA TACCCGAATA 
TTCTTTATTG CAGGGTCCCC TTATATACCG GAAGCTCTGG AAACTTTAGG CAACTACTTT 
TATGGAAGTA AGTAG
 
Protein sequence
MKNKLFIILG FLCMSTLLFA GGSKEGSTKQ EKGREMYGYM VPASVPQRTA VGQVVLLQML 
DMLDVDIVAR PSTKREISAR YKDKTEIGMP MRVDLEKLKE VNPDFYLATG DRGAPIAEQL 
KALNIPAEFL QTTTYTDILN SMKYLGEVYN KQKEAAAYVK EVEDVVAKVK AANKNKKPLK 
VLIIAGFPNS MSIHTEGSFV GSLIKVLGAE NIWKDNTVKN TTVPMNLELV KASNPDIILL 
TSHGDAKDTA KMYEKEFQSD FWQKIDAVKN KRYYSLDTRI FFIAGSPYIP EALETLGNYF 
YGSK