Gene TDE1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1094 
Symbol 
ID2740224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1128205 
End bp1129782 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content39% 
IMG OID637159968 
Producthypothetical protein 
Protein accessionNP_971702 
Protein GI42526604 
COG category[S] Function unknown 
COG ID[COG1543] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATT ATAAATTAAT TTTTATTTTG GATGCTCATT TGCCGTATGT ATGCAATGAA 
GTTGAGCAGG GCCTTATAGA AGAGGATTGG CTTTTTGATG CTTTATCTTA TCTTTATCTG
CCTGTCTTGA AAATGTGTTC TAACTTACAA AAAGAAAATA TTCCGTTTAA AATAGGTGTT
GTTTTTGAAC CCGCACTATG CGATATGCTT GACGACAAGG TTTTGCAGGA TAGATACCGT
CAACATGTTC AGCGCAAAAT CGAGTTTGCA AAAAAAGAAC TTGAATGCTT TGCAGAATGT
GCAGAGACAA AAAAACTTAT TCAGTACAAC TTAAAGCGTT TTAATGATGA TAAGCGTATC
TTTGAAGATT GCGGAGGAAA TGTTTTAAAG CAGTTTGATT ATCTTGCTCG TCAAGGTTAT
GTAGAGCTGT TGGCAACGAC TGCAACCAAT TCATTCTTAC CGTTTTTTTT GAGTATGCCG
GAAGCTATTG CTGCACAGAT AGAAATGGGG CAGATAAATT ACCGCAAACA TTTCAGCTCT
GTTCCCTCAG GTTTTTGGAT TCCTTCAATG GCTTATTTTG ACGGTTTGGA TGATATTATA
AGAAGTTACG GTTATGATTA TACGGTTGTT TCTTCGGAAG GTTTTTTGCT TTCGGATAAG
GTTCCGCCTG CCGGTGTTTT TTCGGCAGCA GCTTCAAAAA ACGGGTTAAA ATTTTTAGCC
TGTGATCTTT CCGCTTGTAA TTCTATTTAT GATGAGCTCA ACGGGTTTCC TCAAAATAAG
GTTTATATTG ATGTGGAAAA TGATGTCGGC TTTAGACAAT CCGAAGAATA TTTAGCTTCA
GTATTCGATA CTTCAAAGGG CAGGCGGGCA ATAGGGTTCA GGTATTGGTC AAGGGATGAA
GAAGAAACTC CTTATGACAT ACAAAAAGCT CATGCTCAAA TTTTGGCAGA TGCCGAATCC
TATGTAAACT CTCGTGCAGA GGCTTTAAGA GCCGTTAAAG AAACGGGGGG GGGTGAATCA
CCGTTTTCCC TTTTGATTAT CTCATCCGAT TTTTTCGGTA AAAAATGGTG TGAAGGTCTT
ATCTGGCTTG AGCGGGTTTT TAGGCTGATA AATGATAATG AAGAGTTGGA AACTATGTTA
CCTTCAGATG CCGCTAATTT GTCTAAGCAG CTTTATACTG TTAAGCCGTT TTTTTCTTCC
TTTTTAAAGT CAGGTTATGC GGATGAACTT TTAACAAATG AAAACGACTG GATGTATAGA
TATATAGTTA AGATTACCGA GAGGATGATC GATCTTGTCG AGATGTTTCC TGCAGACGGC
AGCTTAAAAG AGCGCGTTTT AAATGCTGCG GCGAGAGAGG TGCTTCTTTT ACAGTCCGTT
TATTGGCCCC TTTATATAAA TGATCCGCAG CTTAAAGATT TTGCAGAAAG GCGTTTTGTA
GAGCATGTCA ATTCTTTTAC GGCAGCCTAT GAGGCCCTTG GAGCCGATTC GCCTGATGCA
AAGTGGCTTT CAGAACGCGA AAGTAAGTAT CCCGTTTTTA AAGATATAAA TTACCGTATT
TTTAGCCGCA AAAAATAA
 
Protein sequence
MKDYKLIFIL DAHLPYVCNE VEQGLIEEDW LFDALSYLYL PVLKMCSNLQ KENIPFKIGV 
VFEPALCDML DDKVLQDRYR QHVQRKIEFA KKELECFAEC AETKKLIQYN LKRFNDDKRI
FEDCGGNVLK QFDYLARQGY VELLATTATN SFLPFFLSMP EAIAAQIEMG QINYRKHFSS
VPSGFWIPSM AYFDGLDDII RSYGYDYTVV SSEGFLLSDK VPPAGVFSAA ASKNGLKFLA
CDLSACNSIY DELNGFPQNK VYIDVENDVG FRQSEEYLAS VFDTSKGRRA IGFRYWSRDE
EETPYDIQKA HAQILADAES YVNSRAEALR AVKETGGGES PFSLLIISSD FFGKKWCEGL
IWLERVFRLI NDNEELETML PSDAANLSKQ LYTVKPFFSS FLKSGYADEL LTNENDWMYR
YIVKITERMI DLVEMFPADG SLKERVLNAA AREVLLLQSV YWPLYINDPQ LKDFAERRFV
EHVNSFTAAY EALGADSPDA KWLSERESKY PVFKDINYRI FSRKK