Gene TDE1092 details

Gene Information

• Locus tag: TDE1092
• ID: 2740222
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1123896
• End bp: 1127255
• Gene Length: 3360 bp
• Protein Length: 1119 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637159966
• Product: hypothetical protein
• Protein accession: NP_971700
• Protein GI: 42526602

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAGTA TAAAAGAGCT TGAAAAATTT AAAAATCAAC TTCTCGCAAT AGCAAACGAA 
CCCGAAATTA CGGCAAAATG GGGGGAAAGA CGTGAAGATC TTCCTTTACC TAAAGAAGTG 
CCTCTTCCTG ATGTAAATCT GGATGACTTA TTAGGTTTTA AAGAAGAAGA CAAAATTCCT 
CCTAAACAAG AACAGGATGA TTCTTCGGAA TTTGATGTGG CAGATATCTT TCCTGCAGAA 
AAAGATGAAA ACGATGGCGC TTCCCAAGAC TTTGACAACA TGCTTTCCGG TTTGGATCTT 
GAAGGACCTG ATTCATTGGA TGACATAGAC GGCTTAGATG ATGACGGCTT TGATGTACCC 
GAAGCTCTGC TCTCCGGACT GGGGGATATG GTTGAAGATG CCAGAAGTGA AGATGCCGTA 
AATACGAATG ATGAAACAGA TGATATTTTC CCGGATTTTG ATACGGACTT TGCAGTACAG 
GAGCCGGTTT CAGATGAAAC AAATAAACCC GACATAGAAA ATATAGCCGA TTTAGATGAT 
TTTACTGATG AAATAGCACC CTTAGAAGAT GCCGGCACGT CTTTCGAACC TGCCGATTTA 
GGCATAACCG CATCAAGCGA TACCGATAAT GATGTAGGCG AACTCGAAAG TATAGATTTT 
TCACCCGCGA ATGAAGGTCT TGCAAGCATG GATTTTGCTC CTCTGTCCAA TAATCCTGAC 
AGCATAGATA TGTCGCCGGA AATAGATGAG CTTGAGGGTC TAGACATATC ACCTGAGAAA 
GACTCTCCGA AAACTTTCGA TCTATCGTCT AAAGCTGATG AACTTGAAGA CTCTGACCTA 
TCGCCTGAAA GGGACAAACT TGAAGACCTT GACCTATCGC CTGAAACTGA TGAACTTGAA 
GACCTTGACC TATCGCCCGA AGCTGATGAG CTTGAAGATC TTAACCTATC ACCGGAAGAC 
GAAGGCCTTG AAAGTATGGA TATTTCTCCC ATCACAGATA CCCCCGACAG TATAGATCTG 
TCTTCTCCAC AATCTGATAA AGGAGATTTT TCAAGCTTTT CAAAATCATC AGATCCGCAG 
GAACCCTCCT TTGACGAATC TTTGACGGGA GAAGACTTGC ATGGTTTGGA AGAGTCAAGC 
CCTGCTCAAG AAAATGTCTC ACCGCCGGGA AGCGGCTTTA CAGACATAGA TATTCCCGAA 
ATAGACGAGC ACACAGCCTT TGCTATAGAT GACAATGTTT TAAATACCGA AATGGGCGGA 
GGAATGGATG ATTTTTCCGT TCCTGAAAGT TTTATCCAAT TTTCTCCCGA GAAGAATTTT 
AAATTTTTTG AATCAAAAAA GCCCATCGAT GAAGAAGAAT ATGAGGGAAA AATTCCCCTT 
TCAATTTCTG AAGATGATTA TGACTACCTG ATAGAAAGAG TTTCTTCATT CCCTCTCAAT 
TTAAGAATAG AACTTGAAGA CTATCTTGTA AATGTGGACG ATTCCGAATT AAACAAGATG 
GAAATCGTTC ATTTAATTGT AAACGATGTT TCTCTAAAAA AGATAGTAAG CAAATTAGAA 
GGTATCTTAG ATAAATCCAT TCCTATTCCG AGGGGATTCG ATAAAAAATC CTATGAAGAC 
TACGAAAAAG AAAAACGCAG CTTTAAGTAC CGCTTTGTAC ATAAAATATT ACCTGCAGCA 
ATTTTAACCA CTGTAGTCCT ATGTTTTATA TTTTCGATTT TTGTTCTTGT ATGGCAATTT 
ATATACAAAC CGGTTGTAGC CGAAGGCTAC TATAAAGAAG GAATGACCAG TATAGAATCG 
GGCCAATATG AAAGAGCTAT CAAGCGCTTT GATGAGGCGG GAACTTATAA GAAAAAACGA 
AAATGGTATT TTAAATTTGC AAATGCCTTC CGTGAAAAAA AGCAGTTTCT ATCCGCAGAA 
ACAATTTATG AGCGGCTTTT ATCCGACTTT AACCATGACC GCCAAGGCGG TATCGAATAT 
GCAGATATGC TCAGTACCGA TTTACGCAAT TATGAAAAGG CCGAAAAGGT TCTTAAAAGA 
GGAGTCCTAG ACTATCACAT AAATGACCAA AGTACTCTTC TAGCCTTAGG AGACGTTTAT 
TTGGACTGGG CAGATGAAGA TTCTACAAAG TATGAAGAGG CCAGAAAAAC CTATGCAAGC 
CTTATAAACC TTTACGGATC CAAGGACGTA TTTTCAGGAA GAATGATGCG TTACTTTATC 
CGCACGGACA ATTTGGCTGA AGTTTTACCT TTAAAAAACT ATTTTTTAAA CAAAAAACTG 
CCCGATGAAG ACCTCATCGA ACTCAGCGGC TATCTTCTTG AAAAACGGTA TGAGCCCAAA 
CCTACCGATT CTGAAAATCT GATAGGCAAA ATAGATGATT TGCGGGAACT ATTGGAAAAA 
TCCATAAAAA AACGGCCTGA AAGCCCTGAA GCCAATTATA ATATGGGACG CTTCTTTTTA 
CACAATCAAA AAAATGAAGC AGCCAAGGAT TATCTTGTAA ACGCAATAAA CCTCTACGAA 
GACAGCATAA AAATGACGCC CAAACGTACT ATCAGACAGA TAGATGCAAT GCGTCTTTAC 
GGAGAGCTCA TAGCAGGCGA TAAGCTGTAT AACGAAGCTC AAGAAATCTA TGCAAAAGCC 
TTGTCCAAAT ACGAAGCTTA CACAGCTCAA AAGGGCATTT ATCCGTCCCC TGTTGTCGGA 
AAACTTTATG CAAACTATGG AGATATTTCT TATTTTATAG CCGGAGATTA TGATGAAGCC 
TTGGATGCTT ACGAACATGC AGTCCGTGAA TTAAATAACA GTCCCTCAAT TCAATACAAG 
ATGGGCTATA TCTATTATCA AAAAGAAAAT TATTCGGATG CGATGAAGGC TATGACTCTG 
GCTTACAGCG AGAAACCTAA CGATAAGAAC CTTTTATACG GATTTGGAAA TGTCCTATTT 
AAATATACCA ATTATTTTGC GGCCCAAGCT TACTATGAAA GACTGATGGA ATTACTGGAA 
GCCGAAAAAA TAAGAAAGGG AATTATTTTT CCGCAAACCC GTGTTGACCA TGCGGAATTT 
GTAGAAGACT ATATGCACAC TTCAAATAAT CTTGCTGTAG TGCTTAACAG GATAGCCGTT 
CAAAACGGAG ATTCCAACAA AAACGGAAGA GCCCTATCCT TGTTCGGAGA ATCGACAAGG 
GCTTGGGACG CTCTAAACAG AAATCCGGAA ACTATGATTC GGGCAAAAAC GATAAACCTA 
GCTTATGCAA ATATTCAAAA CATGGTAAAA CCGCGCTCTG CATTTGTACC GGAAATCTAC 
AGCGATATAC CTAAGACCCT TGAAAACGAA AAGATTCTAC AACAAACGGA AGACAGATAG 

 

Protein sequence

MPSIKELEKF KNQLLAIANE PEITAKWGER REDLPLPKEV PLPDVNLDDL LGFKEEDKIP 
PKQEQDDSSE FDVADIFPAE KDENDGASQD FDNMLSGLDL EGPDSLDDID GLDDDGFDVP 
EALLSGLGDM VEDARSEDAV NTNDETDDIF PDFDTDFAVQ EPVSDETNKP DIENIADLDD 
FTDEIAPLED AGTSFEPADL GITASSDTDN DVGELESIDF SPANEGLASM DFAPLSNNPD 
SIDMSPEIDE LEGLDISPEK DSPKTFDLSS KADELEDSDL SPERDKLEDL DLSPETDELE 
DLDLSPEADE LEDLNLSPED EGLESMDISP ITDTPDSIDL SSPQSDKGDF SSFSKSSDPQ 
EPSFDESLTG EDLHGLEESS PAQENVSPPG SGFTDIDIPE IDEHTAFAID DNVLNTEMGG 
GMDDFSVPES FIQFSPEKNF KFFESKKPID EEEYEGKIPL SISEDDYDYL IERVSSFPLN 
LRIELEDYLV NVDDSELNKM EIVHLIVNDV SLKKIVSKLE GILDKSIPIP RGFDKKSYED 
YEKEKRSFKY RFVHKILPAA ILTTVVLCFI FSIFVLVWQF IYKPVVAEGY YKEGMTSIES 
GQYERAIKRF DEAGTYKKKR KWYFKFANAF REKKQFLSAE TIYERLLSDF NHDRQGGIEY 
ADMLSTDLRN YEKAEKVLKR GVLDYHINDQ STLLALGDVY LDWADEDSTK YEEARKTYAS 
LINLYGSKDV FSGRMMRYFI RTDNLAEVLP LKNYFLNKKL PDEDLIELSG YLLEKRYEPK 
PTDSENLIGK IDDLRELLEK SIKKRPESPE ANYNMGRFFL HNQKNEAAKD YLVNAINLYE 
DSIKMTPKRT IRQIDAMRLY GELIAGDKLY NEAQEIYAKA LSKYEAYTAQ KGIYPSPVVG 
KLYANYGDIS YFIAGDYDEA LDAYEHAVRE LNNSPSIQYK MGYIYYQKEN YSDAMKAMTL 
AYSEKPNDKN LLYGFGNVLF KYTNYFAAQA YYERLMELLE AEKIRKGIIF PQTRVDHAEF 
VEDYMHTSNN LAVVLNRIAV QNGDSNKNGR ALSLFGESTR AWDALNRNPE TMIRAKTINL 
AYANIQNMVK PRSAFVPEIY SDIPKTLENE KILQQTEDR