| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1038 |
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| Symbol | |
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| ID | 2741312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1065495 |
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| End bp | 1067066 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637159911 |
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| Product | hypothetical protein |
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| Protein accession | NP_971646 |
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| Protein GI | 42526548 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00793798 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CTATTTTAAT TACCGGCGCT TCAGGCTCCA TGGGCTCTGA AGTTTTAAAA
CAAATTGCCG AAACCGGAAA ACACGATATT ACCATAATCT TGCGAGAAAA AAAAGCCAAT
ATACGCTTAG CTAAATCTTT AAAAAAAAGA TATCCTGATA TTTTAAAAAT TATTTTCGGG
GACTTATCAA TCTTTGCCGA CTGCGAAAGA GCCGTCGAAA ATGCCGATTA TATAATCCAT
TGTGCTGCGA TAATTCCTCC CGTAATAGAC CACAATCCCG ATGCAGGCTA TAAATCAAAC
TTTTTAGGCA CCTTAAATTT GATAAATGCC GTAAAAAAAA CGCCCCAAAA AGACAGAATA
AAATTCATTC ATATAGGAAC TGTCGCTCAA TACGGGAATA GAACTTTCAA ACACCCATGG
ATAAGAACCG GGGACCCTTT AATAGGTTCA GCCTTTGACT TTTACGGGGC CACTAAGATT
ATGGCCGAGC GGGAAGTAAT AGAATCGGGC CTAAAATATT GGGTTTCCTT GAGGCAGTCG
GGAGTTTTAT ACGATGATAT TATGCTTAAA AACATGGATG ACGGCCTTAT GTTCCACACA
GGCTGGAATA CTCCAATCGA ATGGGCAACA GCCCGCACCT CAGGCCTCAT GCTTAAAAAC
CTCATCGAAA AAGATACAGG TGGCACCTTG CCCGAAGATT TTTGGAAGAG GGTCTACAAT
ATAGGAAACG GAAAAGAGGC TCGGGTTACC GGTTATGAAA CCCTCGACCG AGGCTTTAAA
CTTATGGGCA GATCGGCAAA GGAGATTTTT AAACCCCATT GGAATGCGGC CCGCAATTTT
CACTGCGGCT GGTTCTATGA TTCCCGTATT TTAAATGATT ATCTTGACTT TCAATATGAA
GGTTTTGAGG ACTTCTTTAA AAAACTCGAT AAAAAGTTTT GGTATTTTAA GCTGGGAAAA
CCATTTCCGC GTCTTATTAG AAAATTTGCC ATAGAACCTC TTTTAAAAAC AAGCAATGCC
CCTCTTTATT GGGTTAAGCA CAATTTTGAA GGCAGAATAA GGGCTTTTTT CGGCTCGAAA
GAAGACTTTG AAAAAATCCC TCAAAACTGG AAAGAATATA AGCTTTTATC GGAAAACAAA
AATCCGAAAA CGGGAGAAAT GCTGAACTAT TCCGAGTTAA AAGACGAAAA AAAAGCCGCT
TCCCTTTTGC TGAATCACGG CTATGACGAA TCCAAAAAAG AAAGCGAACT CGATATAAGC
GATGTACGGG AAGCTGCCCG TTTTAGGGGC GGCGAATGCT TAAGCACCGA AATGAAAAAG
GGAGACCTTT ACACTCCGCT TGAGTGGAGC TGCGCTTACG GCCACAAATT TAAAGCGAGT
CCTTTCCTTG TTCTAAAAAC AGGGCACTGG TGCCCCGAAT GCGCATGTCC TCCATGGAAT
TTTGATGAAC AGGCAAAGAA GGTTCCTTTT TATGCACAAA TTTGGTATGA CGATCACAGC
CCCGATGAAA ACAATTTTTA TGATAAGGAC TGTTTTAGGG ATATTTTAGC TTCTAATTCT
GCAATCTCCT GA
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| Protein sequence | MKKTILITGA SGSMGSEVLK QIAETGKHDI TIILREKKAN IRLAKSLKKR YPDILKIIFG
DLSIFADCER AVENADYIIH CAAIIPPVID HNPDAGYKSN FLGTLNLINA VKKTPQKDRI
KFIHIGTVAQ YGNRTFKHPW IRTGDPLIGS AFDFYGATKI MAEREVIESG LKYWVSLRQS
GVLYDDIMLK NMDDGLMFHT GWNTPIEWAT ARTSGLMLKN LIEKDTGGTL PEDFWKRVYN
IGNGKEARVT GYETLDRGFK LMGRSAKEIF KPHWNAARNF HCGWFYDSRI LNDYLDFQYE
GFEDFFKKLD KKFWYFKLGK PFPRLIRKFA IEPLLKTSNA PLYWVKHNFE GRIRAFFGSK
EDFEKIPQNW KEYKLLSENK NPKTGEMLNY SELKDEKKAA SLLLNHGYDE SKKESELDIS
DVREAARFRG GECLSTEMKK GDLYTPLEWS CAYGHKFKAS PFLVLKTGHW CPECACPPWN
FDEQAKKVPF YAQIWYDDHS PDENNFYDKD CFRDILASNS AIS
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