Gene TDE1029 details

Gene Information

• Locus tag: TDE1029
• ID: 2741507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1058714
• End bp: 1059154
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637159902
• Product: Hsp20/alpha crystallin family protein
• Protein accession: NP_971637
• Protein GI: 42526539
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0071] Molecular chaperone (small heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00339514
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGTT TAAGTCTTTT TAGTCCGTCT TTTACGGACA GCGTATTTGA TGCCCTTGAT 
AGGAGCTTGG GTCCCAATTT TGGAGTTTTT GCTCCGATCA AGAATGCAAG CTGCGGAATG 
CCGAGTGTCG ATATCCGCGA AACCGAAAAA GCCTATGTTA TGGAAGTAGA TCTTCCGGGT 
TACAGCGAAA AAGATGTTGA AATCAGCTTA AAAGATAGGC TTATGACAAT CTCATCTTCC 
AAAAAAGAAG AAAAGGAAGA TAAGGGAGCA GAGTACATCA TAAAGGAGCG AAGTTCAAGG 
CATTTTATGA GGCGTTTTAC CTTGCCTGAG GATATAAACT CCGATGAAGT TTCTGCAAAA 
TTTGAAAACG GTGTTTTGGT TGTAAATATT CCGAGAAAAC CTGATACCCA GCCAAAACAA 
ATAGAAATCA AAACTGCATA A 

 

Protein sequence

MNSLSLFSPS FTDSVFDALD RSLGPNFGVF APIKNASCGM PSVDIRETEK AYVMEVDLPG 
YSEKDVEISL KDRLMTISSS KKEEKEDKGA EYIIKERSSR HFMRRFTLPE DINSDEVSAK 
FENGVLVVNI PRKPDTQPKQ IEIKTA