Gene TDE1017 details

Gene Information

• Locus tag: TDE1017
• Symbol: xseA
• ID: 2740997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1048075
• End bp: 1049271
• Gene Length: 1197 bp
• Protein Length: 398 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637159890
• Product: exodeoxyribonuclease VII, large subunit
• Protein accession: NP_971625
• Protein GI: 42526527
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1570] Exonuclease VII, large subunit
• TIGRFAM ID: [TIGR00237] exodeoxyribonuclease VII, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAAA CTTATTCCGT TTATGAAATT ACTTTACAGA TAAAAGAGCT TTTGGAATCC 
GGCTTCGGAT ATGTCTCGAT TGAAGGAGAA ATTTCCAACT TCCGTCCCTC GGCGGCGGGG 
CATCTTTATT TTATTTTAAA AGATGAAAAG GCTTCAATTC AGGCTGTAAT GTTTAAGGGA 
AAGACACGCT CTTTGAGCTT TGTGCCCAAG GATGGGATGA CCGTAAAAGC TGAAGGGGCA 
ATTTCGGTAT ATGAGCAGCG CGGTTCCTAT CAGATTATAA TAGAAGAGAT GAGCCTCGCA 
GGCGAGGGGA ATATTTTAAA AATGCTGGAA GAACGCAAGA AAAAACTTGC CGCAGAGGGC 
ATTTTTGATT CTGAAAGAAA GAAACCTTTG CCTTATTTTC CGAAACGAAT TGCCGTAATT 
ACAAGTCCCA CAGGAGCCGC CGTTCGGGAT ATTATAAATG TAGTAAAAAG ACGGAACGAA 
AAAATAGGCA TAGTTGTTCT TCCTGCAATC GTTCAGGGGG AAGAGGCTGC ACCTGTCTTA 
ATCAGGCAGT TAAAAATTGC CGACGAAAAA AACTTAGGCG ACCTTATCAT AATAGGAAGG 
GGAGGCGGCT CTTTGGAAGA CCTCCTTCCA TTTTCGGATG AAGAGCTTGT CAGGGCAATA 
GCTGCCTGTA AAACCCCCGT CATTTCTGCA GTAGGGCACG AAATAGATTG GGCTCTCTCC 
GATTTTGCAG CCGACATGAG GGCTCCCACC CCATCCGCCG CCGCAGAGCT GGCCGCTCCA 
ATTTTAAACG ATATTATGTA CTCCATAGCC GTAAATCGGG AAGACCTTAC ACAAAATATT 
GAAAACCGCA TCGAAAGGAT AAGGCTCATG TTAAATAATT TTAAGCCCGA TTCCTTGGAA 
CTGCGCTTTA GAAACATTCA GCAGCCCCTT CTTGCAAGAT TCGACAATGC AAAGGAAGAA 
ATCCTATCCG GTATGCAGGA GCGATGTAAG GATCTTAGGC AAAGACTTTT AGTTTTAAAC 
AAGATTTTGG AGGGGGCAAA CCCTCAAGGT ATCTTGGATA GGGGATACTC CATTGTCCGC 
AATGCCCAAA CAGGAAAAAC TATCCGCTCC TTTTCCCAAG TTAAAGAAGG AGAAGCTCTG 
TTAATTCAGC CTTCAAAGGG AACTATAGAG GCTGAGGTAA AAAGGGTAAG CAGTTAA 

 

Protein sequence

MAQTYSVYEI TLQIKELLES GFGYVSIEGE ISNFRPSAAG HLYFILKDEK ASIQAVMFKG 
KTRSLSFVPK DGMTVKAEGA ISVYEQRGSY QIIIEEMSLA GEGNILKMLE ERKKKLAAEG 
IFDSERKKPL PYFPKRIAVI TSPTGAAVRD IINVVKRRNE KIGIVVLPAI VQGEEAAPVL 
IRQLKIADEK NLGDLIIIGR GGGSLEDLLP FSDEELVRAI AACKTPVISA VGHEIDWALS 
DFAADMRAPT PSAAAELAAP ILNDIMYSIA VNREDLTQNI ENRIERIRLM LNNFKPDSLE 
LRFRNIQQPL LARFDNAKEE ILSGMQERCK DLRQRLLVLN KILEGANPQG ILDRGYSIVR 
NAQTGKTIRS FSQVKEGEAL LIQPSKGTIE AEVKRVSS