| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1001 |
|---|
| Symbol | pyrE |
|---|
| ID | 2739078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1027793 |
|---|
| End bp | 1028497 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637159875 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | NP_971610 |
|---|
| Protein GI | 42526512 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAAG ATGAAAAGAA AATTGCAGAG GTTCAAAAAA AATATGGGGC GCTTTTGGCT
AAAACGGCCT TTGAGTTGGG TGCCTTAAAG CTTTCTCCCA ATGAACCCTT TACTTGGGCA
TCGGGCTACC GTATGCCTAT TTATAACGAT AACCGCCGTT TTTTAGCCCT GCCTGAGATG
CGCCGTACAA TAGCAGAAGC CTTCGCAGAG CTTTTAAAAG CGGTTGACTT TGACCCCGAA
TGGCTTGCAG GAACAGCTAC TGCCGGAATT CCTCATTCAG TAAGTTTGGG AGACCTCTTG
CAAAAAAGCG TTTCCTATGT ACGCTCAGGC GGAAAAGATC ACGGCTTAAA AAACCAGATT
GAGGGTTTGG GCGCTAATGC GGATTATAAA GGTGCCGATG TGCTTGTTGT TGAAGATTTA
ATTTCGACAG GGGGAAGCTC CATAAAGGCT GTTGAGGCCG TGCGTAATGC AAACGGGAAG
GTCCCATTTT GTTTTGCTAT CTTTTCTTAC GGATTTGCAG AAGCCGAAAA AGCTTTTGCC
GAATTAAAAC CTTCCTGTAT TCCGGTTACT ATTTTAAACT ACGATATTAT GCTGGATGAG
GCTGTAAAGC AAAACTATAT AAGCGAAGAA AATAAAAAGA GTCTGGGTGA ATGGAGGCTG
GATCCTTTCG GTTGGGGCGA AAAACACGGC TTTCCCAAGG TTTGA
|
|---|
| Protein sequence | MHKDEKKIAE VQKKYGALLA KTAFELGALK LSPNEPFTWA SGYRMPIYND NRRFLALPEM
RRTIAEAFAE LLKAVDFDPE WLAGTATAGI PHSVSLGDLL QKSVSYVRSG GKDHGLKNQI
EGLGANADYK GADVLVVEDL ISTGGSSIKA VEAVRNANGK VPFCFAIFSY GFAEAEKAFA
ELKPSCIPVT ILNYDIMLDE AVKQNYISEE NKKSLGEWRL DPFGWGEKHG FPKV
|
|---|
| |