| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0993 |
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| Symbol | |
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| ID | 2739070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1019072 |
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| End bp | 1020505 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637159867 |
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| Product | putative lipoprotein |
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| Protein accession | NP_971602 |
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| Protein GI | 42526504 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0358933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA CCAGGCAAAT TTTTATTTAT TTTAGTTTTT TGATGGCTGT CGCCCTCTTT
TTTTCGTGCA AAACAACTGA AAAAGCCGTA AAATCCCCTG TGACTGAAGA GACAAAAAAA
GCCGAAAAAA CCGGCAAAAA AAGTCCGAGA GAAGAATTTA ATGATAAACT TACCCACCTT
TCTAAAAAGG GAGATTTAGA GGGCATTTTA AAGTTAATAG ATGAATCTGA TCCTGAACTG
ACCAAGGATT TTAAAATACA ATATCTAAAA CTTTCCATCC TCATTTCGAT GAGAAAAACA
AAGGAAGCCG AAACCTTTGC CGATGAACTT TCCAAGGCCT ATCCCAATAA TACAGAAATT
CTTTATGCCC AGGTTATGTT GGCCCAAGCC GAAAACAATA CACAAAAGAA AAATCAATAC
TTGAAAAAGA TATTGGCTAT AAATCCCAAG GATTCAAGGG CATTAACCGA GCAAGGCTTG
GATTTTTACT CTGCCAAAAA ATACAATGAT GCCAGAAGAA AATTTATAGA AGCTTATAAG
GCTGATCCTA AATGTACTGA AGCCCTTATA GGCCTGGGAC GCATAAACTA TCTTGAAGGA
AAACTTGACC AAGCAGAAGC AAATCTAACG GCAGTCTTGG AGCAAGAACC GAATAACAGC
ACAGCCCTTG CAGAACTTGC CCGTATAAAG TCGGAAACAA ATAGAATGTA TCAAGCCCTT
CAAGATATAA ATAGGGCAGC GGAACTTGAA CCTAATAATC CCAGCCATTG GAATGATATA
GGCTCTTATA ATCTTACAAT AGGCAGAAAA GAAGAAGCAA AAAAAGCTTA TGACAAGGTT
ATAGAACTTA CTCCCGATTC CTACGTAGCC TATATCTACC GTGCCGGCAT AAACGATGAA
CTCGGCTACA AAGAAGACGC CCTCGCTGAT TATATAAAGG TATGCAACCT TTATCCGCCT
TATTATTTTG CACTGGAAGG AGCGGGTATC TTGCTTTGGG AAAAAGGAGA CTGGTTAAAT
GCGGGAACAG CATTTTTAAA AGCCTTAAAC AAGGCCCCGG GCTCTTATCA ATATGCGCTT
TTGTATGCAA TAAGCCTCTA TAAACAAAAT AAAAAGCCGG ATGCAAAAAA ATTTATGCAA
AACTATCTAA AATCAATCAA TCGTACCGAA AAAGAAAACG AATACTTTTT ATGCCGCCTT
TTTATAGATT TTGCAGGTGA CAGCGAGCTT ATAAACAGGG CAACAGCAGA AACCGACATG
GTAAAAAAAG GAAGACTGTT TTTTTATCTC GGAGAATTTT ACAATCTGAC CAAAAAATAC
ACTCTTGCAG AAAAGTGCTA TGTTCAAGTA ATGTCGATAG AAAATCCTGC CTTTTTTGAA
TACCGTTTTG CAAAAAAAGC CATGGATGAA TTTAACTCAA GCAACGGGAA ATAG
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| Protein sequence | MKITRQIFIY FSFLMAVALF FSCKTTEKAV KSPVTEETKK AEKTGKKSPR EEFNDKLTHL
SKKGDLEGIL KLIDESDPEL TKDFKIQYLK LSILISMRKT KEAETFADEL SKAYPNNTEI
LYAQVMLAQA ENNTQKKNQY LKKILAINPK DSRALTEQGL DFYSAKKYND ARRKFIEAYK
ADPKCTEALI GLGRINYLEG KLDQAEANLT AVLEQEPNNS TALAELARIK SETNRMYQAL
QDINRAAELE PNNPSHWNDI GSYNLTIGRK EEAKKAYDKV IELTPDSYVA YIYRAGINDE
LGYKEDALAD YIKVCNLYPP YYFALEGAGI LLWEKGDWLN AGTAFLKALN KAPGSYQYAL
LYAISLYKQN KKPDAKKFMQ NYLKSINRTE KENEYFLCRL FIDFAGDSEL INRATAETDM
VKKGRLFFYL GEFYNLTKKY TLAEKCYVQV MSIENPAFFE YRFAKKAMDE FNSSNGK
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