Gene TDE0968 details

Gene Information

• Locus tag: TDE0968
• Symbol: efp
• ID: 2740540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 992653
• End bp: 993216
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637159842
• Product: translation elongation factor P
• Protein accession: NP_971578
• Protein GI: 42526480
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAGAG GCGGAGATAT AGCTAAGGGC ACGGTTTTGC TCAATAAGGG AACTCCCTAT 
TTAGTTGTTG AGAGGGAATT TGTCAACCCC GGAAAGGGTG CGGCCTTTGC CCGTGTTAAA 
ATGAAAAATC TAAGAGACGG TTCCGTTTTA ATGCAGACCA TCAAAACTGC AGACACCGTT 
GAAGATGCAG TAGTAGATAC CCACAAGTGT CAGTATCAGT ACAAAGACGG AGACCAGTTT 
ATGTTCATGG ATACGGAAAG TTTTGAATCC ATTTCCGTAC CTGCCGAAAC AATAGGCGAC 
AAGGAACATT ATCTAAGAGA AGGCGATGAA TACGATATTC TCATCTGGGA AAATGAACCT 
ATCGATGTAA GGATTCCCAC AAAGATGATT TTTATTGTAG AGCAAAGCGA AAACTATATA 
AAGGGAGATA CCGTTTCGGG AGCAACAAAA CCCATAGTTA CCGAAACAGG TCTTGTAGTT 
CGTGTTCCCC TATTTATTAA ACAGGGCGAA AAAATTCTCG TAAACACCGA AACTAACGAA 
TATCAGGAAA GAGTTAACAG CTAA 

 

Protein sequence

MIRGGDIAKG TVLLNKGTPY LVVEREFVNP GKGAAFARVK MKNLRDGSVL MQTIKTADTV 
EDAVVDTHKC QYQYKDGDQF MFMDTESFES ISVPAETIGD KEHYLREGDE YDILIWENEP 
IDVRIPTKMI FIVEQSENYI KGDTVSGATK PIVTETGLVV RVPLFIKQGE KILVNTETNE 
YQERVNS