| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0921 |
|---|
| Symbol | |
|---|
| ID | 2740386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 940208 |
|---|
| End bp | 941947 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637159795 |
|---|
| Product | ABC transporter, ATP-binding/permease protein |
|---|
| Protein accession | NP_971531 |
|---|
| Protein GI | 42526433 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.451099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA AGACCAATAA ACTCAAAGTA AATTATAGAT TTTTTCTCTC GTACCTAAAA
TACTGCAAGA CTTATGTCTT AGCAGCCTTT GTTGTAGTAG GAATTTTTAT TGCATCTTCA
GCCTATCTTC CTACAATTAC GGCAAGCGTT ATAAATGCCG ACCTTGTAAA TATGCCCGGC
TTAAAAAATT TTTTAATTAA ACATGCCCTT TTGTTTTTGG GGACTGCCCT TTTATTTTTT
TTATCGATGT ATGTAAAAAC ATTGCTTTTT AGAAAAATTG CAAATACCGC CTGTGAACAT
ATTCAAATGG ATATGGCCGG TCATCTTTTA AATTTAAAGA TGAAACATTT TGATGAAATG
ACTTCGGGAA ATATAATGAG CCGTTTTTCT TCCGATGTAA ATGCAGTAGG CGATTTATAC
TTTTTGGTTT TGGGCGAGGT ATTTAGTGTA ATTTTATTAT GTATAGTTTT ATATATCCGT
TTGGCACTTA TGAGTTCCTA TCTTTTTGGG GCTAGTTTTG CCTATCTGCC GGTTGTTTAT
TTTCTTGCTC GGTATTATTT AAAAAAGAGC GACAAGCCGA CACGGGATTA TAGAAATTCA
ATCGGAGAAT TAAACGGATT TTTTAACGAA AGCATTAATT CTATTGAAAC CGTGCAAGCT
TTTTGTGCAG AGGAAAAAAT AGAAAAAGAG TTCGATAAAT TTAATCTCCC GGCATATACT
TCAAAACGAA AAATGGTTTT ACTCTCGGGG CTTTTTTCTT GGAATATTAT TGCAAGAATT
AGAACCTTAA TTTACGCCGC CCTTTTGGGA GTGTTCGGAT ATCTGTATTT TCAGGGAGCT
CATTTTCTTG TCGGTACTCT TGTAATCGTT ATAAGTTATA ATAAGGAAAT AACCGATGTC
TTTTTAAAAT TATTTATGCA GATAAATATT TACAAAAACG CTTTTGTTGC GGCGGGAAGA
GTTTCGGAGA TAATCAATTT TGAACATGAA AGAACAAACG GCACTCCTCA TTCTCCCATG
GGAGATATAA AATTTTCAAA CACTCAATTT GAATACAAAG AAGGCATTCC AATTTTAAAA
GGACTTGATT TTAATGCGGA AGACGGGATG ACCATAGCCT TTGTCGGAAA GACCGGCTGC
GGAAAATCTA CGATTATGAA TTTGATTTTA GGTTTTTATG AAAATTCCGG CGGTAAGGTT
TTAATTGACG GGCAGGATAT ACGCTCTCTT GAATTAAAAA CCCTGCGTTC CAAGATTGCA
GTGGTCTTGC AGGAACCCTA TCTTTTTAGC GGAACGATTT TTGACAACAT AAGTTTAAAC
GATCCTCTTA TAAATAGAGA ATCTTGCGAA AAAGCTTTAA AGGCTGTAGG CGGCACAAAT
CTTATAGAAC ATTCGAAAAA AGGTTTGGAT GCTGAAGTGA ACGAAAACGG AAAAAACTTT
TCGGAAGGAG AGAGGCAGAT TATCTGTTTT GCCCGTGCCA TGGTAAGAGA TCCTAAAATT
CTAATCTTAG ATGAGGCTAC GGCAAACATT GATACCGAAA CCGAAAAACT TATAAATGCA
GGTATCGAAG TTTTAAAGAA AGGGCGAACA ACACTTATAA TCGCGCACCG TCTTTCTACT
GTAAAAAATG CGGATATAAT AAACGTAATC GATGACGGCA AATTATTGGA ATCGGGAACT
CATGAAGAAC TTATTGCCCT AAATTCCAAA TACGCCGAAT GGTACAGACT GCAAAAGTAG
|
|---|
| Protein sequence | MKDKTNKLKV NYRFFLSYLK YCKTYVLAAF VVVGIFIASS AYLPTITASV INADLVNMPG
LKNFLIKHAL LFLGTALLFF LSMYVKTLLF RKIANTACEH IQMDMAGHLL NLKMKHFDEM
TSGNIMSRFS SDVNAVGDLY FLVLGEVFSV ILLCIVLYIR LALMSSYLFG ASFAYLPVVY
FLARYYLKKS DKPTRDYRNS IGELNGFFNE SINSIETVQA FCAEEKIEKE FDKFNLPAYT
SKRKMVLLSG LFSWNIIARI RTLIYAALLG VFGYLYFQGA HFLVGTLVIV ISYNKEITDV
FLKLFMQINI YKNAFVAAGR VSEIINFEHE RTNGTPHSPM GDIKFSNTQF EYKEGIPILK
GLDFNAEDGM TIAFVGKTGC GKSTIMNLIL GFYENSGGKV LIDGQDIRSL ELKTLRSKIA
VVLQEPYLFS GTIFDNISLN DPLINRESCE KALKAVGGTN LIEHSKKGLD AEVNENGKNF
SEGERQIICF ARAMVRDPKI LILDEATANI DTETEKLINA GIEVLKKGRT TLIIAHRLST
VKNADIINVI DDGKLLESGT HEELIALNSK YAEWYRLQK
|
|---|
| |