| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0894 |
|---|
| Symbol | |
|---|
| ID | 2739768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 910508 |
|---|
| End bp | 911299 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637159768 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971504 |
|---|
| Protein GI | 42526406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAT ATTACAAAGT TTTTAAAATA AGTTTGGCAA ATCAATTGGA ATATAGAGTT
AATTTTATTT CCGGATTTTT ATTTTCACTC TTTCCTTTTA CAGTTAATGT ATTGTTATGG
ATTGCCGTCA GTTATCAAAG TAAAGATATG CCTTTTAAAG CAGACGGTAT AGTATCGTAT
TACTTTTTGA CTTTGATAAC CTACAATATT ACTTCAACGG TTTCCGTATT TAAAATTTCC
GATGATATAA GGCTCGGCAC ACTCAATCAG TATCTTATAA AACCGTATAA TTATGCGCTG
TATCAACTTG CTTCCGATTT GCCTCATCGT TTTATTTTCA TTGTTATGAA TGCGGTTTCG
ATTACGGTTT TATATTTTTT GCTGCAAAGA TATTTTGTGT TTACACTATC ATTATGGAAG
GCTTTATTTT TTGTGCTCTT TTTGATCGCA GGTTATCTCA TCAATTTTTT TATCGATTTT
TTGATAGCAC TCTATAGTTT TTATTTTTCG CGTGTTTCTT CACTCTATAC ATCGATACGG
GTACTTAAAA ATATTTCCGC CGGTATTATT TTCCCGCTTG TCCTTTTACC CGAATCGGTG
TTTAGTCTTT TAAAGAACTT ACCCTTTGCC TTTATTTCCC ATATTCCGGT AAGTCTTTTA
CTCGATGATG TTCCGCTATG CACCGCTTTT ATTTCCTTAT GTAAAAGTTT AGGCTGGATA
ACGCTGCTTG CTATTTTCTG TGCAGTAGTA TGGAAAAGGG GAATGAAAAT CTATTCCGCC
TATGGAGGAT AG
|
|---|
| Protein sequence | MNAYYKVFKI SLANQLEYRV NFISGFLFSL FPFTVNVLLW IAVSYQSKDM PFKADGIVSY
YFLTLITYNI TSTVSVFKIS DDIRLGTLNQ YLIKPYNYAL YQLASDLPHR FIFIVMNAVS
ITVLYFLLQR YFVFTLSLWK ALFFVLFLIA GYLINFFIDF LIALYSFYFS RVSSLYTSIR
VLKNISAGII FPLVLLPESV FSLLKNLPFA FISHIPVSLL LDDVPLCTAF ISLCKSLGWI
TLLAIFCAVV WKRGMKIYSA YGG
|
|---|
| |