Gene TDE0852 details

Gene Information

• Locus tag: TDE0852
• Symbol: rplM
• ID: 2741363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 875159
• End bp: 875587
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637159725
• Product: 50S ribosomal protein L13
• Protein accession: NP_971462
• Protein GI: 42526364
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000022737
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTA TTTTTTTTAA AGAACATGAA GCGCCGCGCT CTTGGTACCT TATTGATGCC 
GCCGGGAAGC CGCTTGGCCG CGTTGCTGCT AAAACTGCAG CTATGCTGAG AGGAAAACAC 
AAGGTAAGTT TTGCACCTCA TCAGGAAATC GGTGATTATG TCGTTATTAT TAATGCCGAA 
AAAGTAGCCG TAACAGGAAA TAAGGCTAAG GATAAGATGT ACTATACTCA CTCCGGTTAT 
GTAGGCGGTT TAAAGTCTAT CAACTTTAAC GGCTTAATCG CTAAAAAACC GGCTGAACCC 
TTGATGATTG CAATTAAAGG TATGCTTCCT AAGGGACCCC TTGGAAGAAA ACTTTTAACG 
AATGTTAAGG TCTATGCAGG CCCCGAACAT CCTCACCAAG CACAAAACCC CATAGCGGTT 
GAAGTATAA 

 

Protein sequence

MKTIFFKEHE APRSWYLIDA AGKPLGRVAA KTAAMLRGKH KVSFAPHQEI GDYVVIINAE 
KVAVTGNKAK DKMYYTHSGY VGGLKSINFN GLIAKKPAEP LMIAIKGMLP KGPLGRKLLT 
NVKVYAGPEH PHQAQNPIAV EV