Gene TDE0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0804 
Symbol 
ID2739546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp826962 
End bp828089 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content36% 
IMG OID637159677 
Producthypothetical protein 
Protein accessionNP_971414 
Protein GI42526316 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.671535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAA TTGAAGGAAC ATACAACAAA GCTAGTGTAA TGATCGATTC AATCGATTCC 
GAAACCGAAA GACAAATTAA AACCTTTCTC AATCATAAGG CCTTTGAAGG CACAAATATA 
GCAATAATGC CGGACTGCCA TGCAGGCAAA GGAGCCGTTA TCGGTTTTAC AATGAATATA 
GATAAATACA TAATTCCAAA CATTGTGGGA GTAGATATCG GCTGCGGGAT TCTTTCGGCT 
CGGCTTAATA TAAAAAATCC GGATCTTGCA GAACTGGACA ACTTTATCAA AAAAAATATT 
CCTCATGGAA AAGCCGTTCA TAGGAACATA AAAATAGACA ATAAAGAATT TGAAGAAGAA 
ATTATAGAAG AATCAAAAAA GGTTCATATG GATGAGGACA GAGCTTTAAA AAGTATAGGA 
ACCTTAGGAG GCGGAAATCA TTTTATAGAA CTTGGAAAAG ATTCTCAAGG AAGACTATGG 
CTCACGGTTC ATTCGGGAAG CAGAAATCTA GGCCTTCAGA TTGCCGTCTT TTATCAAAAA 
AAAGCACAGC AGCTTTTAGA TGAACAAAAA CTTCTCACAC CTGAAGATAG AAATTTGGAA 
TACTTATTTA CAGAAAGTGA TGAGGGAAAA GCTTACCTAA GAGCAACCTA TTTTGCTCAA 
AAATATGCAA AAGAAAACCG AAAAAAAATG ATAGAATTAA TCTCGCAATT TTTACATGCA 
GAAATTGAAG AAACTGTAGA ATCGGTTCAC AACTTTATAG GAGAGGACGG CATCATCCGA 
AAAGGAGCAA CTTCAGCCGG ATTAAATGAA AGGCTTATTA TTCCTTTTAA CATGCGTGAC 
GGATTTGCAT TTTGTGTAGG AAAAGGGAAT AATGACTACA ACCAATCGGC ACCTCATGGA 
GCGGGAAGAA TTATGTCCCG CTCCAAAGCA TTTAATGAAC TTTCACTAAA AGACTTTCAG 
AGGGAAATGA AAAGTGCCGG AATATTTACA ACAACTGCAA CGAAAAACAC CTTAGATGAA 
GCGCCCTCCG CCTATAAAAA TAAAAATCTA ATTCTAAAAC ACATTAAGCC GACTGCCGAT 
GTAAAAGATT TTGTAAAACC TATATATAAC TTCAAAGCAC CTAATTAG
 
Protein sequence
MQVIEGTYNK ASVMIDSIDS ETERQIKTFL NHKAFEGTNI AIMPDCHAGK GAVIGFTMNI 
DKYIIPNIVG VDIGCGILSA RLNIKNPDLA ELDNFIKKNI PHGKAVHRNI KIDNKEFEEE 
IIEESKKVHM DEDRALKSIG TLGGGNHFIE LGKDSQGRLW LTVHSGSRNL GLQIAVFYQK 
KAQQLLDEQK LLTPEDRNLE YLFTESDEGK AYLRATYFAQ KYAKENRKKM IELISQFLHA 
EIEETVESVH NFIGEDGIIR KGATSAGLNE RLIIPFNMRD GFAFCVGKGN NDYNQSAPHG 
AGRIMSRSKA FNELSLKDFQ REMKSAGIFT TTATKNTLDE APSAYKNKNL ILKHIKPTAD 
VKDFVKPIYN FKAPN