| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0790 |
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| Symbol | rpsK |
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| ID | 2740668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 817091 |
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| End bp | 817471 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637159663 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | NP_971400 |
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| Protein GI | 42526302 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000111637 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACTG TAAAGAAAAG AAAAGAAAAG AAAAGCATAT ATGAAGGCAA TGTTTATATT
CAAGCAACCT TTAATAACAC AATTATTACG ATAACCGACT TAAAGGGAAA TGTTCTTTCA
TGGGCATCTT CAGGCGGCTT AGGCTTTGCC GGTGCCAAAA AATCGACACC CTTTGCGGCT
CAGACCGTTG CAGAAACAGC TGTACAAAAG TGCCAGCCCT ACGGCTTGCA TGAGGTTCAT
GTTTTTGTAA AAGGTCCCGG AGTCGGCCGT GAATCGGCTA TCAGAACGCT TGGAACAATG
GGATTAAAGG TTCGCTCAAT CAGCGATGTA ACTCCCATTC CGCACAACGG CTGCCGTCCC
AAGAAGACGC GCCGAATATA A
|
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| Protein sequence | MATVKKRKEK KSIYEGNVYI QATFNNTIIT ITDLKGNVLS WASSGGLGFA GAKKSTPFAA
QTVAETAVQK CQPYGLHEVH VFVKGPGVGR ESAIRTLGTM GLKVRSISDV TPIPHNGCRP
KKTRRI
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