| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0680 |
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| Symbol | secF |
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| ID | 2739673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 717703 |
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| End bp | 718944 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159556 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | NP_971293 |
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| Protein GI | 42526195 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATCAGTTT TTCGAAATTT TTCGTTCCGT GCATTATTTT AAGTATAGGG
CTTATAGCCT TCGGAATTAT AGGGTATTTT ACCAAAGGAA TAAATTTCGG TATTGACTTT
CAGGCCGGTT TTATCGAAAA GGTAAAAATC GCCCCCACAG CAGTAGAGCT TTCCTATGAA
GGACCTTTAA CGGTTTCTTT TTCGCAAGGT ATATCCGACA TTTCGATTAC TACCACCTCT
CTGGATGGAG AAAACAAATC TTATGTCTTT AAGTTTGCCG ATAATCCGAC TCTTAAAGAT
TTCGCTGACG GCCTTGCCTC TATTGATGGT TTAAAGGTAA AAGTTACCGC TTCGGGAAAT
GTGCTTCTTA AAAACTTGTT TTCCAATTCG GAATCTTCTT CCCGTCTTTC GGCTAATGTG
TTTAGACTTC ACCATTTGGA AAAAGGTCTT AAACCGATAA ATACCGATGA GGTTCGCCAT
GCGCTTTCTT CAATACCCTC AGTTTCGGTT CAACAACTGG GAACGCCTGA AGACAGGTAC
TTTCAGATAA GACTTGCCGA TGACGGAAAA TATGAAGATG CAAACAAAGA ATTACGCTCG
ATTATAAACA CTGCCTTAAA TGCAGCCTAC GGAATCGAAA ACATTGCAGT TATAAGTACG
GACTTTGTAG GTTCCCGTTT TTCTTCTTCA TTGGCACAAC AGGCAATATT GCTGGTAGGC
GGCGCCTTGG TTTTAATCTT TATTTATGCA ATGTTCCGCT TTCAGTGGAA TTTTTCGCTC
GCAGCAATTA TTGCTCTGCT TCACGATACG CTCATAATGA TTATGTTTAT CTCGTGGACA
CAGATGGAAT TTAATTCTAC GACAATAGCG GCCATTCTTA CGATTATAGG TTATTCAATA
AACGACACAA TCGTTATTTT TGACCGTATC CGCGAAAAGA TTCATCTTGA ACCTAAGCTG
GAATGCAAGG AAATTTTAGA CAAAGCCCTA ACTGAGGTAT TTACCCGAAC AATTATTACA
ACCCTTACAA CGATGGTTGC GGTTGTAGCT CTTTATTTGT TTACCACCGA TTCGATGAAG
GATTTTGCCT TAGCCTTAAT TGTAGGTCTT ATAAGCGGAA CCTATTCATC AATCTATGTT
GCATCTTATT TTATCGCTCT TACCTCCAAG GGTAAAAAAG CCGGAGAGAT GATTACCAGA
GGCAAAAAAG CCCCGGGTGA ACTTTCAGGA GCGGTTATCT AA
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| Protein sequence | MKKIISFSKF FVPCIILSIG LIAFGIIGYF TKGINFGIDF QAGFIEKVKI APTAVELSYE
GPLTVSFSQG ISDISITTTS LDGENKSYVF KFADNPTLKD FADGLASIDG LKVKVTASGN
VLLKNLFSNS ESSSRLSANV FRLHHLEKGL KPINTDEVRH ALSSIPSVSV QQLGTPEDRY
FQIRLADDGK YEDANKELRS IINTALNAAY GIENIAVIST DFVGSRFSSS LAQQAILLVG
GALVLIFIYA MFRFQWNFSL AAIIALLHDT LIMIMFISWT QMEFNSTTIA AILTIIGYSI
NDTIVIFDRI REKIHLEPKL ECKEILDKAL TEVFTRTIIT TLTTMVAVVA LYLFTTDSMK
DFALALIVGL ISGTYSSIYV ASYFIALTSK GKKAGEMITR GKKAPGELSG AVI
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