Gene TDE0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0673 
Symbol 
ID2739666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp712130 
End bp713173 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content31% 
IMG OID637159549 
Producthypothetical protein 
Protein accessionNP_971286 
Protein GI42526188 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATATAATCGC AATTATTTAT GCAGTTGCTG CAGCAGCTTT TTATGCATTA 
AATGTTCCTT GCTCCAAAAT ACTCCTTCAA AATATTTCAC CTGTATTTAT GGCCGGACTT 
CTTTATATTG GAGCAGGGCT TGGTGTAGGA ATTTTGTATT TATTCAATTT TAAAAAAGAG 
CAAAAATCTG AACGGCTTGA TAAAAATTAT TTACCGTATA CTATTGGAAT GATTTTTCTT 
GATATTGTCG CTCCAATTTT GTTAATGCTT GGAGTGAAAT ACGGAACTTC ATCAAATGCA 
TCTTTGCTTG GAAATTTTGA AATAGTAGCT ACAGCATTAA TTGCATTGAT TATATTCAAG 
GAAAAAGTGA CATGGCGATT ATGGATTGCA ATTTTTTTTA TTACCGCTTC AAGTATAATT 
CTTTCGTTTG AAAATATTGA AGGATTAAAT TTTTCCATAG GCTCTTTGTT TGTTCTTGGA 
GCAACAATTT GCTGGGGATT GGAAAATAAT TGTACCCGCA GAATGTCAGA TAAAAGTACA 
TATCAGATTG TAACAATAAA AGGACTTTGT TCAGGATTTG GTTCGATAAT TGTAGCTTTT 
GTTTCCGGTG AAACCGATTT TACTCTTAAA TATATTCCTT TCGCATTATT GTTGGGATTT 
GTATCCTACG GATTAAGTAT TTTTACATAC ATTCGTGCTC AAAAATACTT GGGTGCAGCT 
AAAACAAGTG CATATTATTC GATTGCACCA TTTATAGGAA CATTTTTGGC TTTTGTATTA 
TTAAAAGAAA AAATATCAAC TAAATATATA TCGGCATTAT TCGTAATGAT TATAGGTACT 
GCCTTTGCCG TGTATGACAC ATTAATTAGA AAACATTTGC ACGGACATAG GCATACATTT 
ACACATACAC ATAACGGCAT AACGCATACC CATACAATAT CCCATTCTCA TTTACATAAT 
CACTTTATTT CTGATTCAAA ACATGGTCAT CATCACAGCA TTGAGGAATT AGAAAATGAA 
TTAAAAAATG AGATAGGAAA ATAA
 
Protein sequence
MNKNIIAIIY AVAAAAFYAL NVPCSKILLQ NISPVFMAGL LYIGAGLGVG ILYLFNFKKE 
QKSERLDKNY LPYTIGMIFL DIVAPILLML GVKYGTSSNA SLLGNFEIVA TALIALIIFK 
EKVTWRLWIA IFFITASSII LSFENIEGLN FSIGSLFVLG ATICWGLENN CTRRMSDKST 
YQIVTIKGLC SGFGSIIVAF VSGETDFTLK YIPFALLLGF VSYGLSIFTY IRAQKYLGAA 
KTSAYYSIAP FIGTFLAFVL LKEKISTKYI SALFVMIIGT AFAVYDTLIR KHLHGHRHTF 
THTHNGITHT HTISHSHLHN HFISDSKHGH HHSIEELENE LKNEIGK