Gene TDE0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0670 
Symbollon 
ID2739663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp708078 
End bp710453 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content42% 
IMG OID637159546 
ProductATP-dependent protease La 
Protein accessionNP_971283 
Protein GI42526185 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA AAAAAGAAAT TGTTCCGATA GAAAGCTTGC TACCTCAAAA GTTAAACATT 
GTTCCTTTGA GCGGCAGGCC GATTTTTCCC GGCATTTTTA CGCCGCTTTT AATTAATGCC
CCCGAAGACA TAAAGTCAAT CGAAGATGCC TATGCCGGCG ACGGCTTTAT AGGGCTTACC
CTTCTTAAAA ACAATATAGA AAACCCTCAA GCCAAGGACT TGTACAAGGT AGGCTGTGCT
GCAAAAATCG TGCGTAAGAT AAATCTGCCC GATGGCGGGC TCAATGTTTT TATAGCCACT
CAAAAACGCT TTAAGATTCG CAAAACCGTC AACGATACAA ATCCGATAGT CGTAGCCGTT
CAATATCTGG ATGATGAAGA AGAAAAAAGC CACGAGGTGG AAGCCCTTAC CAGAGCCCTC
ATAAGCGAGA TGAAGCAGCT TTCTGAAAAC AATCCATTGT TCTCCGAAGA GATGAGGCTC
AATATGATCA ATATTGACCA TCCCGGAAAA ATAGCCGACT TTATTGCAAG TATCTTAAAC
ATTCAAAAAG AAGATCAACA AAAGATTCTT GAAACCTTAA ACGTAAAAAA GAGAATGGAA
GAAGTTTTTG TTCACATTAA AAAAGAACAA GAACTTTTAC AGGTTCAACG CAAGATTCAG
GATGACCTTA ATATGCGTGT CGAAAAAAAT CAACGCGATT ATTTTTTAAG GGAAGAACTT
AAATCCATCA AAGAAGAATT GGGGCTGACC ACAGATCCTA AGACCAATGA AGAAGAAAAT
TTTGCAAAGA GGATAGAAGA GTTTCAGTTT ACCGGAGAGG TAAAAGAAGT GGTGGACTCC
GAGTTTGAAA AATTTAAAAT GCTCGACCCC TATTCTTCCG AATATATAGT TACCCGTAAT
TATTTGGAAA CCATTCTTTC ACTTCCGTGG AAAAATTCGG AACCGGAAGA ATACGATATT
GCAAAAGCTC AAAAGATTTT AAACAAGGAT CACTACGGAC TTGAAGACGT AAAGACCCGA
ATAATAGAAT ACCTTTCCGT TCGTAAATTA AAGAAGGATA CAAAGGGTTC GATTGTTCTT
TTGTTGGGCC CGCCCGGTGT AGGTAAAACG AGTGTCGGAA TGTCCATAGC CAGAGCTATG
TCTAAGCCCT TCTTTAGATT TTCAGTCGGA GGCATGAGGG ATGAGGCCGA AATAAAGGGG
CACCGAAGAA CCTACATAGG AGCCATGCCC GGTAAAATCC TTCAGGGCTT AAAGATAGTA
AAAACCAATT CTCCCGTTTT TATGATAGAC GAGGTCGATA AGATGGGGCA AAGCTATCAG
GGAGACCCTT CAAGTGCCCT TCTCGAAGTT TTAGACCCCG AGCAAAATAT AAACTTTAGG
GACCACTATT TGGATTTGCC CTTTGACCTT TCCAACATAG TTTTTATTCT CACTGCAAAC
ACCCTCGATT CTATTCCCCG ACCTCTCTTG GACAGGGCTG AGGTAATAAA GCTTTCCGGC
TACATTGATT CCGAAAAGGT GCAGATAGCA AAAAAACACC TTATTCCGAA AAGCCTTGAA
AAGCACGGTC TTAAAAAGAA TCAGGTAGTC TACAGTCAGG ATATGCTCCT TTACATTGCC
AACTCTTATG CAAGGGAAGC CGGAGTGCGC AACTTTGAAA AGAAGCTGGA TAAGATTCAC
CGCAAGGTTG CAACCGAAAT TGTAAACGGC AAAAGAAAAG AAGACGAAAA GCTGATCGTA
ACAAAGGCCG ACATTGAAAA GATGCTTGGC AAGGTTATCT TCCGCGATGA CGATATTAAA
AAGGCCGACG TTCCCGGTAC CTCGATAGGC CTTGCTTGGA CATCTATGGG CGGAGATACT
CTTTTGATAG AAACTGCATC TATGCTTGGA AAGGGCGGCT TTAAACTCAC AGGCCAAGCC
GGAAACGTTA TGAAAGAATC CGCAGGCATA GCCCTTTCAT GGACTCGAAT GTTTGCCGTA
GACCAAAAAA TAAAAAAACC GGACTGGTTC GAAAAAAATA TAATTCACCT TCACCTGCCG
GAGGGAGCTA CCCCCAAAGA CGGACCGTCT GCCGGTATCA CTATGGCCAC AGCTCTTTTA
TCTCTTTTTT CAGGGAAAAC CATCAAGCCT AAACTTGCAA TGACCGGAGA GCTTTCGCTT
ACAGGGCAGG TTCTTGCCAT AGGCGGCCTA AAAGAAAAAA CAATCGCCGC CCGCCGCAAC
GGTATAAAGG AAGTCATCAT TCCTCAGGCT AACACAAGGG ACTTGGACGA AATCCCCGAA
TACATTAAAA AGGGCATTAA GTTCTATCCC GTAAGCCATG TTGAAGAAGT CTTGGATATA
GCCTTTAGGG GTGCATTGAC GAAGAAAAAA AGATAG
 
Protein sequence
MSDKKEIVPI ESLLPQKLNI VPLSGRPIFP GIFTPLLINA PEDIKSIEDA YAGDGFIGLT 
LLKNNIENPQ AKDLYKVGCA AKIVRKINLP DGGLNVFIAT QKRFKIRKTV NDTNPIVVAV
QYLDDEEEKS HEVEALTRAL ISEMKQLSEN NPLFSEEMRL NMINIDHPGK IADFIASILN
IQKEDQQKIL ETLNVKKRME EVFVHIKKEQ ELLQVQRKIQ DDLNMRVEKN QRDYFLREEL
KSIKEELGLT TDPKTNEEEN FAKRIEEFQF TGEVKEVVDS EFEKFKMLDP YSSEYIVTRN
YLETILSLPW KNSEPEEYDI AKAQKILNKD HYGLEDVKTR IIEYLSVRKL KKDTKGSIVL
LLGPPGVGKT SVGMSIARAM SKPFFRFSVG GMRDEAEIKG HRRTYIGAMP GKILQGLKIV
KTNSPVFMID EVDKMGQSYQ GDPSSALLEV LDPEQNINFR DHYLDLPFDL SNIVFILTAN
TLDSIPRPLL DRAEVIKLSG YIDSEKVQIA KKHLIPKSLE KHGLKKNQVV YSQDMLLYIA
NSYAREAGVR NFEKKLDKIH RKVATEIVNG KRKEDEKLIV TKADIEKMLG KVIFRDDDIK
KADVPGTSIG LAWTSMGGDT LLIETASMLG KGGFKLTGQA GNVMKESAGI ALSWTRMFAV
DQKIKKPDWF EKNIIHLHLP EGATPKDGPS AGITMATALL SLFSGKTIKP KLAMTGELSL
TGQVLAIGGL KEKTIAARRN GIKEVIIPQA NTRDLDEIPE YIKKGIKFYP VSHVEEVLDI
AFRGALTKKK R