Gene TDE0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0520 
Symbol 
ID2739257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp566164 
End bp566751 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content36% 
IMG OID637159392 
Producthypothetical protein 
Protein accessionNP_971134 
Protein GI42526036 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4282] Protein involved in beta-1,3-glucan synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTAA TTGACAAGAT TAAACAGATA GAAAAGTATA TATGTGAGCA TTTTGAAGAA 
TGGGATTTGG ATGATCCTGT CGAAGAAGAA TATCTGGACG ACTATCAGGA AATTTCCGGA 
GCTTCAGAGG AAGAAATATC AGCCTTTGAG GAGAAGCTCG GTATAACCCT TCCGGAAGAC 
TTCAAAGAAC TTTACCGATA TAAAAATGGA AGTAAATACT TAAGTATTTT ACCCTGCGTT 
ATAGATGAAA TAGAAATGCC GTTTAATCTG ATGAGTTTAC AGACTGTAAC AAACACAAAA 
GAACATTTTC AAAACAGAGA TGCGCTCTTA ACGGAATTTA CGGATTATTT TACAAACGAA 
GATATTGAAA ATATGAAGGA TAGCAGGATT AAACCCTATC TCTTCAATAA AAAATGGATT 
CCCTTTGCCG AATACTGCGA CAGCTGCTTT CTGATGCTTG ATTTTGATCC GGATACAGCG 
GGAAAAGAAG GTCAGATTAT CTGCTATATT CATGATCCTG ATAAAGTGGT TTATGCAGCG 
CCGAGTATTA CGGAATTGAT TGATGATATA ATTGCAGAAA TTGATTAA
 
Protein sequence
MQLIDKIKQI EKYICEHFEE WDLDDPVEEE YLDDYQEISG ASEEEISAFE EKLGITLPED 
FKELYRYKNG SKYLSILPCV IDEIEMPFNL MSLQTVTNTK EHFQNRDALL TEFTDYFTNE 
DIENMKDSRI KPYLFNKKWI PFAEYCDSCF LMLDFDPDTA GKEGQIICYI HDPDKVVYAA 
PSITELIDDI IAEID