Gene TDE0470 details

Gene Information

• Locus tag: TDE0470
• Symbol: ftsH
• ID: 2739224
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 524641
• End bp: 526617
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637159342
• Product: cell division protein FtsH
• Protein accession: NP_971084
• Protein GI: 42525986
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG ATAATGACGA TAAAAACCAA AACGATCCCT TTAACTTTTT TAATTTCGGG 
CCGGATTCCG ATGGAGACGA TAAAAAATCA CCCAAGAAGC CGTTTTTTTC TTTATGGCTT 
TTAGCGCCGC TTGTAGTTAT CATTTTTATC TTAATTAATC AGTTAATGGT GCTCAATAGT 
TCCGCCCTGA TTCCTTTTTC GGAATTTAAG GATAGAATTA CAACGGGACA GATAAAAAAG 
GTTGTTCTCG GTCCTGTTTA TTTTACCGGT TATACCAGCA TACAGGATGA TGATTCTTCA 
AATACCTCTT TATTTTCATT TTTGTCGGTA CAAAAAAATA CTAATGAATA TGTAACAGTC 
GGGATATACA CCTCGGAGTT TTTACAGCTT TTAGATGACC ATCATGTGGT TTATCATGTA 
AAGCCTAAGG AAAGAAGCTA TATTGTTGAG CTTCTTTTAC AGTGGGTACT TCCCTTCCTT 
TTGATATTCC TTGTTTGGCG TGCCATCATG AGACGGATGA CCAAGGGGAT GGGCGGTTTG 
GGCGGAAGTA TTTTTTCTCC CGGGCAGGCC AGAAGTGCTG CAATAGACGA GGGAAAGGTT 
GAAACCCGCT TTAAGGACGT CGCAGGCGTC GATGAAGCTA AAGAAGAATT AATGGAAGTT 
GTAGACTTCT TAAAATATCC TCAAAAATAT ACCGAAATAG GCGGAAAGAT TCCGCGAGGT 
GTTCTTTTGG TAGGCCCTCC CGGAACGGGA AAAACCCTTC TTGCGCGAGC CGTTGCAGGT 
GAAGCAGGGG TTCCCTTCTT TAGAATAAGC GGCTCGGACT TTGTCGAAAT GTTTGTCGGC 
GTAGGAGCTT CCCGTGTGCG TGACCTATTC AGGCAGGCCC GTGAAAAAGC TCCCTGTATT 
ATCTTTATAG ACGAATTGGA TGCTATCGGA AAATCGCGTC ATAATTCTTA CAGCTCAAAT 
GATGAGCGGG AACAAACTTT GAACCAGCTT TTGGTTGAAA TGGACGGCTT TGACAATAAG 
ACGGGCTTGA TTCTTTTGGC TGCCACCAAC CGCCCTGATG TTTTGGATCC GGCCTTGTTA 
AGACCCGGCC GCTTTGACAG GCAGGTTGTG GTTGACCGCC CCGATGTAAA GGGAAGAGAG 
CAGATTCTCA AGCTTCATGC AGAAAATGTA AAACTCGATG CTTCGGCCGA TTTGGCTTCG 
ATAGCCCGCA TTACAGCCGG CTGTTCAGGT GCCGACCTTG CAAATATTAT AAATGAGGCC 
GCTCTTTTGG CTGTCAGAAG TAAAAGAAAG ACCGTCATTA TGACTGACTT GGATGAAGCT 
GTTGAAAAGG CAATGATAGG CTTACAGAAA AAATCCCGCG TAATTCGTGA AGAAGAAAGA 
AAAGTAATAG CCTATCATGA AACAGGTCAT GCCATCGTAG GCAGCTTTAC CGATGGAGCC 
GATAAGGTCC ATAAGGTAAC CATAGTTCCC CGCGGAACCT CGACTTTGGG CTATACCTTC 
CATATTCCCG AAGACGATAA ACATATCGTT ACCGAAAAAC AGCTTTTGGC CGAGATAGAT 
GTTCTTTTAG GAGGCCGAGC CGCAGAACAG GTAAAATTCA ATATGGTTTC TACCGGAGCT 
GCAAACGATT TAACCCGTGC CACCGATATT GCCCGAAGCC TTATAACCGA TTACGGTATG 
AGCTCTAAAT TTAAAAACGT AGCCTTGAGC AAGCGTGGTG CCGGATATCT TGGCGATAAT 
GAACCTAGGT TGGTGCGTGA ATATGCCGAA ACAACCCAGC AATACATCGA TGAAGAAATC 
GCAAAGATAA TCAATACCCG CTATGAGGGT GTTATAAAAA TGCTGAACGA AAAAAAGCAT 
CTTTTGGAAA AGATAGCAAC AACCCTTTTA GAAAAGGAAA CCATAGAAAA CGAAGAATTC 
GATGCGATAA TCGCTGAGGA GAAGGCTCCT AAACTTTTTG AAAAAGAGAG TGAATAG 

 

Protein sequence

MSKDNDDKNQ NDPFNFFNFG PDSDGDDKKS PKKPFFSLWL LAPLVVIIFI LINQLMVLNS 
SALIPFSEFK DRITTGQIKK VVLGPVYFTG YTSIQDDDSS NTSLFSFLSV QKNTNEYVTV 
GIYTSEFLQL LDDHHVVYHV KPKERSYIVE LLLQWVLPFL LIFLVWRAIM RRMTKGMGGL 
GGSIFSPGQA RSAAIDEGKV ETRFKDVAGV DEAKEELMEV VDFLKYPQKY TEIGGKIPRG 
VLLVGPPGTG KTLLARAVAG EAGVPFFRIS GSDFVEMFVG VGASRVRDLF RQAREKAPCI 
IFIDELDAIG KSRHNSYSSN DEREQTLNQL LVEMDGFDNK TGLILLAATN RPDVLDPALL 
RPGRFDRQVV VDRPDVKGRE QILKLHAENV KLDASADLAS IARITAGCSG ADLANIINEA 
ALLAVRSKRK TVIMTDLDEA VEKAMIGLQK KSRVIREEER KVIAYHETGH AIVGSFTDGA 
DKVHKVTIVP RGTSTLGYTF HIPEDDKHIV TEKQLLAEID VLLGGRAAEQ VKFNMVSTGA 
ANDLTRATDI ARSLITDYGM SSKFKNVALS KRGAGYLGDN EPRLVREYAE TTQQYIDEEI 
AKIINTRYEG VIKMLNEKKH LLEKIATTLL EKETIENEEF DAIIAEEKAP KLFEKESE