Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0393 |
Symbol | |
ID | 2739402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 443272 |
End bp | 443919 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637159265 |
Product | TetR family transcriptional regulator |
Protein accession | NP_971007 |
Protein GI | 42525909 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAT CCACTTTTTT AAAATTATCC GATGAACGGA AAGAAAAATT ACGTAAAACT ATATATAATA TGTTTATAAA AAAAGATTAT GAATCTATTT CGATAAGAGA TTTAGTAAAA GAGATGGACA TATCAATAGG GAGTTTTTAT AAATATTTTG ATGATAAGGC GGAAATGTAC CTATTTTTCT TCTCTGAGAT AGAAAAAAAA ATTTTTGAAG AGGAAAAAAG GCGGAATGCG TCTTTTTTTT ACCCGGCGAA ACTGCTTGAT CTGCATGAAA TTTTGACGCA GGAAGAGATA GATTTCAGTA CTTCATGGTT GAATGTTCCC GAAGACGTAC TGTACAAATT TTATTTTAGA GGGCATGCAA AGCAGCTTTA CCGCTCAATT CTTGATGAGC TTACCGAAAT GCAGCAAAAG GCGCAGCTTA ATCCGAATAT TAAGGCAAAT ATAGCTTACC ACATAATAAT TACCTCAATG TTCAGTTTTA TGTTATACAT AAAAGAGAAT AAAATCACGG ATAAGGAAGA TTTCTTTAGT AGAAAAACAA CTTATTATCA AACGGTAATT TTACCGGGTA TATTATCCGA AAAATACTAT AAGCAAAAAT ATTCTAAAAA TGCAATAAAA AGTGAGATTA TATTATAA
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Protein sequence | MPKSTFLKLS DERKEKLRKT IYNMFIKKDY ESISIRDLVK EMDISIGSFY KYFDDKAEMY LFFFSEIEKK IFEEEKRRNA SFFYPAKLLD LHEILTQEEI DFSTSWLNVP EDVLYKFYFR GHAKQLYRSI LDELTEMQQK AQLNPNIKAN IAYHIIITSM FSFMLYIKEN KITDKEDFFS RKTTYYQTVI LPGILSEKYY KQKYSKNAIK SEIIL
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