Gene TDE0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0374 
Symbol 
ID2740126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp428004 
End bp429290 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content36% 
IMG OID637159246 
Productglycosyl transferase, group 1 family protein 
Protein accessionNP_970988 
Protein GI42525890 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATAC TTCACTGCCT TGCACAATTA CCGATGAAAA CAGGAAGCGG GGTTTATTTT 
AGCACCCTCG TCGAAGGAAT GATAAAAAAA GGACATGAAA ATGCGGTTCT TTACGGCACA
CAGCTTCCCT TTGCCGAAAA AACTTTTAAT GAATCTTTAC CCGATAAATT ACAGGGAAGC
GTAAAAGAAT ATCCCATCAA ATTTTTATCC GATTATGAGC AGGAAGAAAA AACTGTTTTT
AATGCAGACC TCCCTTTTCC GATTGCAGGA ATGAGCGACA TAATGCCCTA TACCTCAACC
GTTTATTCCA AAATGAGCGA TGAGATGTAT CAAAAATGGA TTTCGGTTTT TGAAAAAACT
CTTCTCCGTG CAAAAGAAGA ATTCAATCCC GATATCATTA TAAGTCATCA TCTTTTTATT
TTAACCTCTT TGGTAAAAAA AATATTTTCC GGCAAAAAAA TAATAGGCAT AAGTCACGGT
ACGGATATCA GGCAGATTAA AAAAAATCCT TGGATAAAGA CACGGTACAT ACAAAACTTG
GACAAGCTCG ATTTATATTT TACCGTAAGC CCTAAGGATA TTGCCGAAGC GCAAACTATT
TTTTCGGCAC CGCCTGAAAA AATTAAATTG GCAGGAGGCG GCTTTAATCC CGATATTTTT
AACGATAAGG ATAGACATAT CTTTGATGGA ACATTCAAGC TTTGCTATGC AGGAAAGATA
TCCGATTCAA AGGGAGTGTT TGAACTTGCA AAAACTCTTC CGCTTATTTT AAAAAAATAT
CCTAATACGG AACTGACCTT GATAGGAAAT GCAACAGAAG AACAAAAAAA CATTCTTTTA
AAAAATGCCG GCTTCAACGA AAACTTAAAA ATAGTAAATG CTTCATCTCA AATATGTATG
TGTAAAATTT TAAAACAAAA CGATATTTTT ATTTTGCCTT CATACTATGA AGCCTTAGGT
CTTGTCGCCG TTGAAGCCTT AGCCTGCGGC CTTTTTACAG TTACCACAGA AATTGAAGGA
CTTATAAACC TCCTCGGCGA AAAAATCAAC ACAAGCGGCA TTATCGAATT TGTCAAACTT
CCTCGCATTT ACGATGTAGA CAAGGCATAC GAAGAAGATA AGCCCGCCTT TGTCGAAGCC
CTTTCCGAAA AAATCATGCT TCAAATGGAA AGACTTAAAT CCCAAAAAGA TTTTTATTCC
CCTGTCGCAG AAGAAATAAA AAAACATTCT TGGGAAAGTA TTATAGATAG GATTGAAGAG
GAGATTAAAG GTACTTTTTC TTATTAA
 
Protein sequence
MKILHCLAQL PMKTGSGVYF STLVEGMIKK GHENAVLYGT QLPFAEKTFN ESLPDKLQGS 
VKEYPIKFLS DYEQEEKTVF NADLPFPIAG MSDIMPYTST VYSKMSDEMY QKWISVFEKT
LLRAKEEFNP DIIISHHLFI LTSLVKKIFS GKKIIGISHG TDIRQIKKNP WIKTRYIQNL
DKLDLYFTVS PKDIAEAQTI FSAPPEKIKL AGGGFNPDIF NDKDRHIFDG TFKLCYAGKI
SDSKGVFELA KTLPLILKKY PNTELTLIGN ATEEQKNILL KNAGFNENLK IVNASSQICM
CKILKQNDIF ILPSYYEALG LVAVEALACG LFTVTTEIEG LINLLGEKIN TSGIIEFVKL
PRIYDVDKAY EEDKPAFVEA LSEKIMLQME RLKSQKDFYS PVAEEIKKHS WESIIDRIEE
EIKGTFSY