Gene TDE0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0371 
Symbol 
ID2740123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp422827 
End bp424674 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content29% 
IMG OID637159243 
Producthypothetical protein 
Protein accessionNP_970985 
Protein GI42525887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAA AAAGAAAATT GATTTTATGG ATAACAGCTG TTGTATTTGT CTTTTTTATT 
TTGCCTATGG GTATTGCTTA CTTTATTTAT CACGATACTT TCGGTTTAAG ATATACAACT
TCTTCCTATA TGAAGCGGCA GGTAGAAGAA TTTGAAGGAT TGAAATTAAA AAAATATTTT
TTTACTTCAA ATAAGGGACA AAAACTTACT GCGTATAAAT ACTATAAAGA AGACAGCGGT
TATAAGGGGC TTATAATAAT AGCTCACGGA TTTGGAGGCG GAGGGCATAA TTCCTATATG
GATGTTGCAG ATTATTTGGC AGGAAACGGG TATTTGGTGT TTTCTTATGA TGCTACAGGA
AATGATGAAA GTGAGGGAAG CGGAGTCGGA GGTTTGCCCC AGGGGATTAT CGACCTTGAC
TATGCAATCA GGTTTGTAAA AGAAAATGAA GAATTTAAAA ATTTACCAAT TATGCTTTTC
GGACACAGTT GGGGCGGCTA TTCTGTTGGA AGTGTTTTAA ATTTACATAA GGACATAGCG
GCGGTTGTGA CAGTTTCGGG TTTTAACTCT TCTATCGGTA TGATAAAAGA TAATGGGGGA
GACTTTATCG GAAAATGGAT TAATTTTTTT ATGCCATATT TTTCGTTGAT AGAAAAAATA
AAATTCGGAA AGTATGCAAA TTATTCCTGC ATAAAGGGAT TCGAAAATTC CGATACAAAG
GTAATGGTTA TTCACAGTTC TGATGATGAT ACCGTTTCTT TTGAAAATAA TTATAAACCG
TTTTATAAAA AATTCGGAAG CAATAGCCGA TTCACTTTTA TCGAGTATGA TAATAGAGGA
CATAGTTATT TGTATTATAC TGATGAAGCT AGAAGTTACG GTAAAAAACT CAGCGAAGAT
TTTACAAGTT TTAAAAAATC TTTGCAAGTA GAAATTACAC CTGAAATACG AGCCAAGTAT
TTTAAAAAAC ATCTGGACAA AAAACAATTT TTTGAAGTTG ATAAAGGTCT AATGGAAAAA
ATAGTTTTGT TTTATGATGA GAGTTCTGCA GAAAAGGCCT TTACCAAAGA TTATGATTGG
AACAGATATA AAAAAAATAA ACAAATTCTT GACGAGGTTT TTGAATTTAT ACGAAAAAAA
TCTTTAGCAG AAAATGATAT TAAGGAATTA TTAAAAGAAG AAAAAATTAA ACCTGTGAAT
TTAGGTTTTA ATATTTCAAA AGCTTCATTT TCAAAAAACG GAGCTGATGC AGGATTTCGC
ATTGATTATT TTTTATATAA AAACGAAGGA TATAAAATAA ATATTAAGAT TGACAATTTT
GTAAAAGAAA GATTATCTGT TTTGTTTAAA AAAGATAAAA ATATTGAAGC AGAATTTAAT
AATTTTTTTA TTCACAATCT TATAGATAAT TCTTATTCTT ATACGTTTGT TGATAATGAT
ATTGAGAAAA AATATTTATA TGAGAAAAAT ACTTTAGTTG GAAAACCGAA TAAACTGAAC
TTACCCAAAG ATTATCAGAA ATACTATGAT GCTCTCTTTT ATTCTGAGAA TGATATAGCT
TATGGTTATA ATATTGGAAT TACAAATGAA ATTCCTTATG GCCGTGAAGC TATGAATCAT
CTTTTGGAAT TACAAGATGC AAAAATTTTT GAAAATATAT TAATAGGTGA AAACCCTGCC
GGCCGTATGT ATGCTACGGA AGCATTGCTT AATATGTCAA AAAATATAGC GACAATAAAG
AAAATTAATA ATGTATTTGA AATTTTAAAA AAGGATAATA CAACCTATCT ATATTGTGCA
GGGTGTATTG TAATACCTAA AACATATGAG TTTATACAAA ACAATTAG
 
Protein sequence
MKGKRKLILW ITAVVFVFFI LPMGIAYFIY HDTFGLRYTT SSYMKRQVEE FEGLKLKKYF 
FTSNKGQKLT AYKYYKEDSG YKGLIIIAHG FGGGGHNSYM DVADYLAGNG YLVFSYDATG
NDESEGSGVG GLPQGIIDLD YAIRFVKENE EFKNLPIMLF GHSWGGYSVG SVLNLHKDIA
AVVTVSGFNS SIGMIKDNGG DFIGKWINFF MPYFSLIEKI KFGKYANYSC IKGFENSDTK
VMVIHSSDDD TVSFENNYKP FYKKFGSNSR FTFIEYDNRG HSYLYYTDEA RSYGKKLSED
FTSFKKSLQV EITPEIRAKY FKKHLDKKQF FEVDKGLMEK IVLFYDESSA EKAFTKDYDW
NRYKKNKQIL DEVFEFIRKK SLAENDIKEL LKEEKIKPVN LGFNISKASF SKNGADAGFR
IDYFLYKNEG YKINIKIDNF VKERLSVLFK KDKNIEAEFN NFFIHNLIDN SYSYTFVDND
IEKKYLYEKN TLVGKPNKLN LPKDYQKYYD ALFYSENDIA YGYNIGITNE IPYGREAMNH
LLELQDAKIF ENILIGENPA GRMYATEALL NMSKNIATIK KINNVFEILK KDNTTYLYCA
GCIVIPKTYE FIQNN