Gene TDE0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0365 
Symbol 
ID2741085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp411813 
End bp412511 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content33% 
IMG OID637159237 
Producthypothetical protein 
Protein accessionNP_970979 
Protein GI42525881 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0669057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTGA TAATTTCAGA TATTTCTGTT GAGATCTGCA AAAAAAATAT AAAGAATATG 
CACCTATATG TTAAACCCCC TTATGGGAAA GTAAGTGTTT CCGCTCCATA TTCCGTTAAA 
AATCAAACAA TAGAAATGTT TATTCGAACA AAACTATCTT GGATAAAAAA ACAAATCAGC 
AAGTTTGAAA ATCAAGCACG TCAAACTAAA CGGGAATATA TATCGGGTGA AACATTCTAT 
GTATGGGGAA AACGGTATTA TCTGCAACTG GAATATGGAA ATAAAACTTC AATTACACTT 
TTAGGAAATA AAGCTGTTTT TACCGGTAGC AAAAATAGAA CAATGGAATC AAGTGAACGG 
TTTATTAGAG AATGGTATCG CAGCTTATTA AAAACGGAAA TAGAAAGAAT TTTACCAAAG 
TGGAAAAAAA TCACAGGGCT GATACCTTCA AGCTGGCAAA CAAAATATAT GACAACCCGC 
TGGGGTTCCT GCAATTCGAC AACAAAAAAA ATATGGCTCA ATGTTCAACT TGCAAAAAAA 
ACACCGGAAT GTTTGGAATA TGTCATATTG CACGAGCTTA TCCATCTTGA AGAAAAAAAT 
CACAATGACA GATTTATTGC CTTAATGGAT AAGCATATGC CGATGTGGCG AGAAATAAAA 
GATTCTTTAA ACTCTCAACC ATTAGACTAT ATGAAATAG
 
Protein sequence
MIVIISDISV EICKKNIKNM HLYVKPPYGK VSVSAPYSVK NQTIEMFIRT KLSWIKKQIS 
KFENQARQTK REYISGETFY VWGKRYYLQL EYGNKTSITL LGNKAVFTGS KNRTMESSER 
FIREWYRSLL KTEIERILPK WKKITGLIPS SWQTKYMTTR WGSCNSTTKK IWLNVQLAKK 
TPECLEYVIL HELIHLEEKN HNDRFIALMD KHMPMWREIK DSLNSQPLDY MK