Gene TDE0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0343 
Symbol 
ID2741239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp384337 
End bp385455 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content37% 
IMG OID637159215 
Productalpha/beta fold family hydrolase 
Protein accessionNP_970957 
Protein GI42525859 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAT TTATTGCTAT CTTGTTTTGT GTTCTTATTG TTTTGGCTGT ATTCTATGTA 
CTCCGAAATT TAAACTACGA TTATTCCGGG GAGAAGTTTG TAAAGAATCG CTCTTTGAGC
TTAGGTCTGG AAGAAAAACA GTTTTATTTA AAGGATGGAA GCGTCATAAA CTATGCAGAA
GGTCCGGACA ATGGGCCGGA TATGGTATTA TTGCATGGGC AAATGGTGGA CTGGAAAGAT
TACCGCACGG TCTTGCCTGA ACTGGTAAAA AAGTTTCACG TCTTTGCACT TGATTATTAC
GGACATGGAA AATCAAGCAA AAATCCCGAT TTATACAATA TTGAGCGAAT CGGATCCGAT
ATCGCCTTGT TTATACAAGA AAAGGTGGGC TCAAAAGCTA TTATTTCGGG GCATTCATCC
GGGGCATTGA TTGTTGCTTA TATTGCAGCA ACATATCCGG AAAATGTAAA AGCAATTGTG
CTGGAGGATG GACCGTTTTT TGCAACGGAA AAGGGACGTG CAGAAAATAC ATTCTCTTAT
AAAACGTTTC AAAATATCCA CAACTATTTA ACTGAAAAAC CCAACATCAC TTACTTTGAA
CACTACTTAA AGAATGACCC TATGCGTACA TTGTTTAACA TGGACGGAAA AGATAATTGG
ACTAAAATTG TGGCGGAACC TGCAATGAAA CGATTTCGAA AGGATTTGAC AAAAATACCG
ATTATATGGT ACTATCCTCC GGAGTTGGGT GTGAATACCT TACTTCAACT GACAGCGAAT
TTACAAGATG GAACGGGGGA TTATGATTTA AGGTTTGCGG ATGCCTTCTA TGATTTCAGT
TTTTTTAACG GGATAAAACA GGAGGACATG TTGAAACAAA TTAGTGTCCC AACTTGTATC
CTTCATGTAA ACCCACCAAA AAATACCACC CCTTCTTATT ATACGGAAGA AGGGATGCTG
ATTTCTGCAA TGGATGAAAA AGATGCAAAA CATGTTAAAG AATTAATTCG CGGCAGCATT
TTAGTTGAGG GATTTGATTC TATGCATAAT ATTCATGAAG ATAAGCCAAA GGAATTTTTG
AAAAAAGTAG CGGAATTTTT AGATAAGATA GAAAAATAA
 
Protein sequence
MLKFIAILFC VLIVLAVFYV LRNLNYDYSG EKFVKNRSLS LGLEEKQFYL KDGSVINYAE 
GPDNGPDMVL LHGQMVDWKD YRTVLPELVK KFHVFALDYY GHGKSSKNPD LYNIERIGSD
IALFIQEKVG SKAIISGHSS GALIVAYIAA TYPENVKAIV LEDGPFFATE KGRAENTFSY
KTFQNIHNYL TEKPNITYFE HYLKNDPMRT LFNMDGKDNW TKIVAEPAMK RFRKDLTKIP
IIWYYPPELG VNTLLQLTAN LQDGTGDYDL RFADAFYDFS FFNGIKQEDM LKQISVPTCI
LHVNPPKNTT PSYYTEEGML ISAMDEKDAK HVKELIRGSI LVEGFDSMHN IHEDKPKEFL
KKVAEFLDKI EK