Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0342 |
Symbol | mviN |
ID | 2739341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 382218 |
End bp | 383831 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637159214 |
Product | integral membrane protein MviN |
Protein accession | NP_970956 |
Protein GI | 42525858 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTGTTA TGGGTAAGCT TGAAAATAAA AATAAATCTC TTGTAAAAAG CGGGTCAAAA CTTTCTCTTT TGGTTTTAGG GTCAAGGATT TTAGGTCTTG TCCGCCAGAT GACTATGTCT CATTTTTTGG GGACGGGGCC ATTGGCGGAT GCCTTTGCCA CAGCCTTTAT GCTTCCCAAT CTTTTTAGAA GGCTCTTTGC CGAAAACAGC ATAACCGTTG CCTTTATTCC GACCTTTAAC GCCTATCTGC AAAAGCACAA AGATTCGCAA GAATCCGAAA AAACAAAAAA AGAAATAAAC GAATTTTTAA ATTCTATTTT TACTCTTGTA AGCTTTTCTA CTGCCATTGT AGTTACATTG GGCATAATAC TTTCTCCGTT GATAGTAAAA CTTTTTTTTA AAAACATTGC AGACTATGAT TCTACCGTTT TTTTAACGCG GATAATGTTT CCGTATTTAT TTTTAATTTC GGTTGCCGCC TTTTTTCAAG GTATTTTAAA CGGAGTAAAG ATTTTTACCC CATCAGGCTT TACACCTATT TTATTCAACA TATTCGTCAT TTCTTTTACA TACATTTTTG CAAAACCCTT TGGCGATCCT GCCGTCGCAA TGTCATACGG TGTTGTTGCA GGAGGCCTTG TGCAGGCGGT TTTTCAGCTG CCCTTTGTTC TAAAGACGGG CTTTAGTTTT AAGCTCACAA GTCTTGCAAA AACTTTTTCA AACCCCGGAA CAAAAAAAGT TCTTGCCCTT ATCGGTCCGA CCATAATAGG CATGGCAGCC TATCAGATAA ACGATTTGGT TTCTACCTCG CTTGCAACTT CGGCAGGCCT TGGAATAGCC TCGAGCTTAC AATATTCTTT ACGCTTACAA GAACTTTTAT TAGGTATCTT TGCCGTTTCG GTAGGCACCG TAATCCTCCC CGAAATGTCG GCCCTTGCCT TGCGCAAAGA TTGGGAGGCC TTTCAAAAAG TACTCTTACA AGCTATAAAG GTGATAGCTT TAATTACAAT ACCCGCAACC TTTTTCTCTC TTTTGTCGGG AGAAAATTTA ATCATTCTCA TTTACAAGAG CAATAAATTC GATTCCGCTT CGGTAAAATT AACATTGGGA ATTTTTAACT TTCATATAAT CGGACTTTTT GCAATCGCCG TAAACAGGAT TATAGCTCCT GCCTTTTATG CACAAAGCGA TTCAAAGTCC CCGACAATCG CAGGAATAAT CTGCTTTGCA GTTAATATCC TCCTAGCCTT AATTTTGGTA GGCCCCATGG GAGGAAACGG CATCGCTCTT GCTTTGACAA TAGCTTCAGT TATAAACACA ATCATTCTCT TAATATTTTT AAAAAAGAAC AAGGCTCTGG ATGTAAAGAA CCTCATCTTC CCGGCTCTTT TATTTATTGC AAAAATATTC GTTTTTTCGA TTACAGCCTC AATTCCCCTT TATTTTTTAA AGGATAAGAT TTATTCTCCA TTTGCTTCAT TCGGAAAACT TATCGGACAA GGAGTTCCGC TTTTTATTTC TTTTATTATT TTTGCAGGGC TTGGTGCAGG CTTTTTACTT ATAACTAAGG ATAGAACAGC AAACATAATT TTAAACCGCT TAAAGGAAAA ATAA
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Protein sequence | MLVMGKLENK NKSLVKSGSK LSLLVLGSRI LGLVRQMTMS HFLGTGPLAD AFATAFMLPN LFRRLFAENS ITVAFIPTFN AYLQKHKDSQ ESEKTKKEIN EFLNSIFTLV SFSTAIVVTL GIILSPLIVK LFFKNIADYD STVFLTRIMF PYLFLISVAA FFQGILNGVK IFTPSGFTPI LFNIFVISFT YIFAKPFGDP AVAMSYGVVA GGLVQAVFQL PFVLKTGFSF KLTSLAKTFS NPGTKKVLAL IGPTIIGMAA YQINDLVSTS LATSAGLGIA SSLQYSLRLQ ELLLGIFAVS VGTVILPEMS ALALRKDWEA FQKVLLQAIK VIALITIPAT FFSLLSGENL IILIYKSNKF DSASVKLTLG IFNFHIIGLF AIAVNRIIAP AFYAQSDSKS PTIAGIICFA VNILLALILV GPMGGNGIAL ALTIASVINT IILLIFLKKN KALDVKNLIF PALLFIAKIF VFSITASIPL YFLKDKIYSP FASFGKLIGQ GVPLFISFII FAGLGAGFLL ITKDRTANII LNRLKEK
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