Gene TDE0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0342 
SymbolmviN 
ID2739341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp382218 
End bp383831 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content38% 
IMG OID637159214 
Productintegral membrane protein MviN 
Protein accessionNP_970956 
Protein GI42525858 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTGTTA TGGGTAAGCT TGAAAATAAA AATAAATCTC TTGTAAAAAG CGGGTCAAAA 
CTTTCTCTTT TGGTTTTAGG GTCAAGGATT TTAGGTCTTG TCCGCCAGAT GACTATGTCT
CATTTTTTGG GGACGGGGCC ATTGGCGGAT GCCTTTGCCA CAGCCTTTAT GCTTCCCAAT
CTTTTTAGAA GGCTCTTTGC CGAAAACAGC ATAACCGTTG CCTTTATTCC GACCTTTAAC
GCCTATCTGC AAAAGCACAA AGATTCGCAA GAATCCGAAA AAACAAAAAA AGAAATAAAC
GAATTTTTAA ATTCTATTTT TACTCTTGTA AGCTTTTCTA CTGCCATTGT AGTTACATTG
GGCATAATAC TTTCTCCGTT GATAGTAAAA CTTTTTTTTA AAAACATTGC AGACTATGAT
TCTACCGTTT TTTTAACGCG GATAATGTTT CCGTATTTAT TTTTAATTTC GGTTGCCGCC
TTTTTTCAAG GTATTTTAAA CGGAGTAAAG ATTTTTACCC CATCAGGCTT TACACCTATT
TTATTCAACA TATTCGTCAT TTCTTTTACA TACATTTTTG CAAAACCCTT TGGCGATCCT
GCCGTCGCAA TGTCATACGG TGTTGTTGCA GGAGGCCTTG TGCAGGCGGT TTTTCAGCTG
CCCTTTGTTC TAAAGACGGG CTTTAGTTTT AAGCTCACAA GTCTTGCAAA AACTTTTTCA
AACCCCGGAA CAAAAAAAGT TCTTGCCCTT ATCGGTCCGA CCATAATAGG CATGGCAGCC
TATCAGATAA ACGATTTGGT TTCTACCTCG CTTGCAACTT CGGCAGGCCT TGGAATAGCC
TCGAGCTTAC AATATTCTTT ACGCTTACAA GAACTTTTAT TAGGTATCTT TGCCGTTTCG
GTAGGCACCG TAATCCTCCC CGAAATGTCG GCCCTTGCCT TGCGCAAAGA TTGGGAGGCC
TTTCAAAAAG TACTCTTACA AGCTATAAAG GTGATAGCTT TAATTACAAT ACCCGCAACC
TTTTTCTCTC TTTTGTCGGG AGAAAATTTA ATCATTCTCA TTTACAAGAG CAATAAATTC
GATTCCGCTT CGGTAAAATT AACATTGGGA ATTTTTAACT TTCATATAAT CGGACTTTTT
GCAATCGCCG TAAACAGGAT TATAGCTCCT GCCTTTTATG CACAAAGCGA TTCAAAGTCC
CCGACAATCG CAGGAATAAT CTGCTTTGCA GTTAATATCC TCCTAGCCTT AATTTTGGTA
GGCCCCATGG GAGGAAACGG CATCGCTCTT GCTTTGACAA TAGCTTCAGT TATAAACACA
ATCATTCTCT TAATATTTTT AAAAAAGAAC AAGGCTCTGG ATGTAAAGAA CCTCATCTTC
CCGGCTCTTT TATTTATTGC AAAAATATTC GTTTTTTCGA TTACAGCCTC AATTCCCCTT
TATTTTTTAA AGGATAAGAT TTATTCTCCA TTTGCTTCAT TCGGAAAACT TATCGGACAA
GGAGTTCCGC TTTTTATTTC TTTTATTATT TTTGCAGGGC TTGGTGCAGG CTTTTTACTT
ATAACTAAGG ATAGAACAGC AAACATAATT TTAAACCGCT TAAAGGAAAA ATAA
 
Protein sequence
MLVMGKLENK NKSLVKSGSK LSLLVLGSRI LGLVRQMTMS HFLGTGPLAD AFATAFMLPN 
LFRRLFAENS ITVAFIPTFN AYLQKHKDSQ ESEKTKKEIN EFLNSIFTLV SFSTAIVVTL
GIILSPLIVK LFFKNIADYD STVFLTRIMF PYLFLISVAA FFQGILNGVK IFTPSGFTPI
LFNIFVISFT YIFAKPFGDP AVAMSYGVVA GGLVQAVFQL PFVLKTGFSF KLTSLAKTFS
NPGTKKVLAL IGPTIIGMAA YQINDLVSTS LATSAGLGIA SSLQYSLRLQ ELLLGIFAVS
VGTVILPEMS ALALRKDWEA FQKVLLQAIK VIALITIPAT FFSLLSGENL IILIYKSNKF
DSASVKLTLG IFNFHIIGLF AIAVNRIIAP AFYAQSDSKS PTIAGIICFA VNILLALILV
GPMGGNGIAL ALTIASVINT IILLIFLKKN KALDVKNLIF PALLFIAKIF VFSITASIPL
YFLKDKIYSP FASFGKLIGQ GVPLFISFII FAGLGAGFLL ITKDRTANII LNRLKEK