| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0293 |
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| Symbol | |
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| ID | 2741384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 322108 |
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| End bp | 323511 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637159165 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_970907 |
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| Protein GI | 42525809 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAATC TATCCTGCTC AAAGTGTGTT TGTGATGAAA CCGGTCTTCA ATTAAAACCT
AAAAAAATAT CAAAAAATTT ATGGAAGCTG GCTTATCCTA CGATGATTTC TGCAGGCTTG
CAAAACTTTT ATGACATTGT CGATATGGTT TGGGTAGGAC AGATATCCAA AACGGCTCTT
TCAGGTGTTA CCCTTTTTTC TTCCATATAC ATGCTTTTTA CCATTTTAAA TGAAGTCGCA
GGTGCAAGTT CCGTGTCGAT GATTTCGCAA AACTACGGCC GAGGCGATAT GGAAAAGACT
CAGCGTATTG CCGAACAGAC TATCAGTTTT AAGGTTGTCC TTGCAATAAT GTCTGCTTTT
CTTTTAGCCA TTTTTTTAAA ACCGATTTTA TGGTTTTTTC TTCCGGATCA AGAAGTTTTA
AATTCCGCTT TGGAATACGG ATGGCTGAGA ATCTTTTTTA TTCCTGTAAT GTTTTCTTCA
TATTCGGTAA ATACGATTTT TAGATGTACC GGAGATGCAA AAACTCCCTT GCACATCATG
ATAATATCCA CTATCATAAA CTTGGTTTTA GATCCTGTTT TTATGTTCGA TATAATTCCC
GGAACAAATA TTCCGGGCTT AGGTATGGGT GTTTTTGGTG CAGCCCTTGC AACGGTAACA
GCCCGAACTA TAAGTTTCTT ATATGGATTT TTAATTCTTT TAAGCGGAAG ACGCAAGGTA
AAAATAAGCT TTAAAGGTCT TTTTAAACTC GACAAAAAAA TAGATACCGA CCTTTTACTC
ATAGGGCTTC CTTCAGGTAT TAATTCCCTT GTCCGCAGCT TTGCTCAAGT AACGATTATG
AAATTCGTAA CGGTATACGG TGCCGATGCA GTTGCTCTTG CAGGTGTCGG CGGAAAGCTT
TCACAGTTTG CCTTTATGCC TATTTTCGGG TTTAATATGG GAGGCGCAAC TCTGGTGGGG
CAAAGCCTTG GCCGAGATAA TGTTAAGGAA GCAAAACTTA CTTCTAAGAT AAACGCTTTT
ATGTCAGCCT CTGTAGTAGG AATTTTTGCA GTCATAATTA TGGGAATGCC TCAAACTTTT
TTGCGGTTTT TCTTCCCAAA TGATCCGTCG ATGCTTTTGC AGGGTAGTTT AATGTTGCGT
ATATTTTATC CGTCCTTTAT AATTTTATCT ATGGGATTGG GGCTTGCTGT GGTCTTTTCA
GGTTCGGGTC ATACAAGGCC CATACTTTAT TCTACCTTGG GTTCTCGCTG GTTTGTACAA
ATCCCGTTTT TATTTTTAGT TGTAAATATT TTACATCTTC CCTTATTTGC CGTTTGGACT
TCATATATTT TTTCGGAGGC AGCCGAATTT ATGGTCATTC TATATCACTA CCGCAAAGGG
GCTTGGTGTA ATAAGAGGGT TTAA
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| Protein sequence | MENLSCSKCV CDETGLQLKP KKISKNLWKL AYPTMISAGL QNFYDIVDMV WVGQISKTAL
SGVTLFSSIY MLFTILNEVA GASSVSMISQ NYGRGDMEKT QRIAEQTISF KVVLAIMSAF
LLAIFLKPIL WFFLPDQEVL NSALEYGWLR IFFIPVMFSS YSVNTIFRCT GDAKTPLHIM
IISTIINLVL DPVFMFDIIP GTNIPGLGMG VFGAALATVT ARTISFLYGF LILLSGRRKV
KISFKGLFKL DKKIDTDLLL IGLPSGINSL VRSFAQVTIM KFVTVYGADA VALAGVGGKL
SQFAFMPIFG FNMGGATLVG QSLGRDNVKE AKLTSKINAF MSASVVGIFA VIIMGMPQTF
LRFFFPNDPS MLLQGSLMLR IFYPSFIILS MGLGLAVVFS GSGHTRPILY STLGSRWFVQ
IPFLFLVVNI LHLPLFAVWT SYIFSEAAEF MVILYHYRKG AWCNKRV
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