Gene TDE0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0242 
Symbol 
ID2741441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp275404 
End bp276114 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content34% 
IMG OID637159116 
Producthypothetical protein 
Protein accessionNP_970858 
Protein GI42525760 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATACAA AAAGAAAAGC GGATCCGAGA ACGGTACTCG GCATTGTATT TATTTTTATC 
TCGTTCGGTC TTGCCGTCAA TAAGCCTCTC CCCTCACATG TTTTACTTAT TATTTGTAAT
TTCTATTTAT GGGATGTACG CGCTTATCGT GAATCCGTTT TATACAGCGG AATGTATAGT
ATCATTGCTG TGTCGATGTT TTATATTCAT TATATTCCGA ATTCGACAAT TGCTCTCATG
ATTGTATCCT TAAGTTATTT TATTCAAAAA TTCGTTATTG CGGTTATGAT GATTATATTC
TTGAAAAAGA AAACTTCCAT GCCCTCTATT ATATCGGCTA TGCAGACGAT GAAATTTCCA
AACATAATAG CAATTCCCTT AATCGTTGTA TTTAGGTATC TCCCGTCCTT AAAAGAAGAT
TACGGCTGTT TAAAAGACAG TTTAAAAATA AGAGGAATTT CTATTTCGGG CTTAAGGTTT
TTAATGCATC CCATTCGTTC TTTGGAACTT ATAATTGTTC CGATTTTATT TAGAAGTCTT
CGCATAGCTG AGGAACTTTC CACATCGGTT TTGCTGAGAG GAATTGAAAA TTATAAAAAC
AGAACAAATA TCTATCCGCT CAAATTTACG AAAACGGATT TTGTATACGG ATTATGTACG
GCTATTGCTG TGGGTGCGGT ATCGTACTTA CAGTTTAGTA ATATTTTTTA A
 
Protein sequence
MNTKRKADPR TVLGIVFIFI SFGLAVNKPL PSHVLLIICN FYLWDVRAYR ESVLYSGMYS 
IIAVSMFYIH YIPNSTIALM IVSLSYFIQK FVIAVMMIIF LKKKTSMPSI ISAMQTMKFP
NIIAIPLIVV FRYLPSLKED YGCLKDSLKI RGISISGLRF LMHPIRSLEL IIVPILFRSL
RIAEELSTSV LLRGIENYKN RTNIYPLKFT KTDFVYGLCT AIAVGAVSYL QFSNIF