Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0242 |
Symbol | |
ID | 2741441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 275404 |
End bp | 276114 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637159116 |
Product | hypothetical protein |
Protein accession | NP_970858 |
Protein GI | 42525760 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATACAA AAAGAAAAGC GGATCCGAGA ACGGTACTCG GCATTGTATT TATTTTTATC TCGTTCGGTC TTGCCGTCAA TAAGCCTCTC CCCTCACATG TTTTACTTAT TATTTGTAAT TTCTATTTAT GGGATGTACG CGCTTATCGT GAATCCGTTT TATACAGCGG AATGTATAGT ATCATTGCTG TGTCGATGTT TTATATTCAT TATATTCCGA ATTCGACAAT TGCTCTCATG ATTGTATCCT TAAGTTATTT TATTCAAAAA TTCGTTATTG CGGTTATGAT GATTATATTC TTGAAAAAGA AAACTTCCAT GCCCTCTATT ATATCGGCTA TGCAGACGAT GAAATTTCCA AACATAATAG CAATTCCCTT AATCGTTGTA TTTAGGTATC TCCCGTCCTT AAAAGAAGAT TACGGCTGTT TAAAAGACAG TTTAAAAATA AGAGGAATTT CTATTTCGGG CTTAAGGTTT TTAATGCATC CCATTCGTTC TTTGGAACTT ATAATTGTTC CGATTTTATT TAGAAGTCTT CGCATAGCTG AGGAACTTTC CACATCGGTT TTGCTGAGAG GAATTGAAAA TTATAAAAAC AGAACAAATA TCTATCCGCT CAAATTTACG AAAACGGATT TTGTATACGG ATTATGTACG GCTATTGCTG TGGGTGCGGT ATCGTACTTA CAGTTTAGTA ATATTTTTTA A
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Protein sequence | MNTKRKADPR TVLGIVFIFI SFGLAVNKPL PSHVLLIICN FYLWDVRAYR ESVLYSGMYS IIAVSMFYIH YIPNSTIALM IVSLSYFIQK FVIAVMMIIF LKKKTSMPSI ISAMQTMKFP NIIAIPLIVV FRYLPSLKED YGCLKDSLKI RGISISGLRF LMHPIRSLEL IIVPILFRSL RIAEELSTSV LLRGIENYKN RTNIYPLKFT KTDFVYGLCT AIAVGAVSYL QFSNIF
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