Gene TDE0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0145 
Symbol 
ID2739300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp166840 
End bp167472 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content47% 
IMG OID637159015 
Productthiamine ABC transporter, ATP-binding protein 
Protein accessionNP_970762 
Protein GI42525664 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.248769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACG AAAAAGCATT TTTACAGCTT AAAAACATAA AAAAACATTT TACCGAAAAA 
GATATTTCCA TTTCCTTTGA ATTAAAAAAG GGGAAAGCTC TGGCCCTCCT CGGGCCTTCA 
GGCTGCGGCA AAACAACGGT TTTAAAAATA ATCTCAGGCC TTGTCCCTCC GGATTCGGGC 
GAAATCATTT TGGACGGAAA AAATATCAAT CACACTCCTC CCGGCAAACG CGGAATCGGA 
ATGGTCTTTC AGGACTACGC CCTCTTCCCT CATCTCAATG TTGAAGAAAA TATTATCTAC 
GGCTTGGTCT CCCAAGGCAT GTCCAAAAAG GAAGCCCGCA AGGCCATTAC CCCTCTTGTC 
GAGCTTTTTC ATTTGGAGGC CTTACAAAAG CGCAAAACGG ATCTTCTTTC GGGCGGAGAA 
AAACAAAGGG TTTCTCTAGC ACGGAGCCTT GCAGTAAAAC CCGCCCTCAT CCTCTTTGAT 
GAACCCCTTT CTGCCCTCGA TGCAGACCTT CGCCTGCACT TGCGTAAAGA ATTAAGAGCC 
AAGCAGGAGA GCTTGGGCTA CACAGCCGTT TACGTTACCC ACGACAAAGA TGAGGCAGCC 
GCTCTTGCCG ATGATGTACT CTACATGGGC TAG
 
Protein sequence
MENEKAFLQL KNIKKHFTEK DISISFELKK GKALALLGPS GCGKTTVLKI ISGLVPPDSG 
EIILDGKNIN HTPPGKRGIG MVFQDYALFP HLNVEENIIY GLVSQGMSKK EARKAITPLV 
ELFHLEALQK RKTDLLSGGE KQRVSLARSL AVKPALILFD EPLSALDADL RLHLRKELRA 
KQESLGYTAV YVTHDKDEAA ALADDVLYMG