Gene TDE0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0121 
Symbol 
ID2741736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp139010 
End bp140575 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content37% 
IMG OID637158991 
Producthypothetical protein 
Protein accessionNP_970738 
Protein GI42525640 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATAC GGGAAAAAAT TGAATTCACA AATAAAAAAG AAAAGAAAAA GCTGGCTTTT 
TTAGGCAGCC TCTTCGTACT TTTATATTCT TTTCTTATAA TGTTAATAAT TTGGCTTTTG
GGAGTTTTCC CTCATGCCCA GATAGATCAG CTTATCTTTA CTGCCGTAAC GCCCATTGAC
GGTACAAGCA GTGAGATCCT TTTAAGTTTT TATCTAAAAG CCCTTGTAAT TCCGATAATC
CTATCATTGA TAAATCTTGT TTTAATCCTA AAAGAAGTAA AACTTGTTTT AAAAACAAAG
AAAGGAAAGA CTTACCGCAT CTTCCCCGTT TTGATAAGAA GGCCCCGCCT TTATATTTTA
ATTTACATTT GTATTTTTTT AGGCTACAGC CAATATAAAT TCGGGTACAT TCAATATATT
TATTATAAAT TAAGCCCCCC AACGGACCTT TATGAAACTA ACTATATAGA CCCTTCAAAG
GTAGAATTTC ATTTTCCTCA AAAAAAGAGA AACCTTATAA TCCTCTACCT TGAATCGATG
GAAATAACTG CTACATCAAA AGAATTCGGA GGCTTATCCC GTTACGATCT TATTCCCGAA
TTACGCGGGA TAGCCGAACA AAATCTTTCA TTCAGCCACT GTGAAAAGTT GGGCGGAGGG
ACCCAAGTTA TGGGAACATC ACATTCCATA GCATCCCTTA CTTCCCTCAA CATGGGAGTC
CCGTTAATTT TAAATCTTCC TTCTTTTGAT TCGTCTTCTT TAAAAATTTC ATCCCTGAGT
ACCGCCTCAA TAAAAATCGA CAGGTTTATG GAAGGAGGTT ACGGACTCGG AGACCTTTTA
TATGATAACG GTTACAATCT GGTGTTCAGT ATGGCAGAAG ACAAAGAATT CGGCTGTTTG
GGAAACTTTT TGACCGGTCA TAAAAATTTT AAGATTCAGG ATTATTCTTA CTTTGTTGAA
AACGGAAGAA TTCCTCAAGG CTACAGTGTA TGGTGGGGCT TTGAAGACGA AAAGCTCTAT
CAATTTGCAC GGGAAGACCT TACAAAGCTT TCAAAAGAAG ATAAACCTTT TGCCTATATT
TTCTTTACTG CCGATACACA CTCTCCCCAC GGTTATGCCG ATGAAAAATG CCCCAAGCTT
TATTTTGAAA AAATACACAA CGTATACGCC GGGGCATCAA AAAAAGCCTA TGATTTTGTA
GAATGGGCTA AAACTCAAGA CTTTTATAAA AACACCACAA TAGTCATTTT AGGGGATCAC
TTATATATGG GCGGAGATTT ATACCTGCCG ACCGTCAAAT TAAAAGACAG ACATCCCTAC
AATGCTTTTA TAAATTCTGC AAAGACAACT GATAAAAACA AAAACCGGCT GTTTACGACA
TTCGATCTTT TCCCCACAGT CGTAGAAAGT ATGGGTATCG AATTCAATGC AAAGGGCTTA
GGCCTCGGCC GTTCTCTTTT TTCGGGCGAA AAAACTCTTC TTGAAGAAAA AGGCTTAAAG
AAGCTTAACT CCGAAATTGA AAAGCCTTCA ATCTTTTATG AAGAAAAACT GATGAAAAAA
CACTGA
 
Protein sequence
MFIREKIEFT NKKEKKKLAF LGSLFVLLYS FLIMLIIWLL GVFPHAQIDQ LIFTAVTPID 
GTSSEILLSF YLKALVIPII LSLINLVLIL KEVKLVLKTK KGKTYRIFPV LIRRPRLYIL
IYICIFLGYS QYKFGYIQYI YYKLSPPTDL YETNYIDPSK VEFHFPQKKR NLIILYLESM
EITATSKEFG GLSRYDLIPE LRGIAEQNLS FSHCEKLGGG TQVMGTSHSI ASLTSLNMGV
PLILNLPSFD SSSLKISSLS TASIKIDRFM EGGYGLGDLL YDNGYNLVFS MAEDKEFGCL
GNFLTGHKNF KIQDYSYFVE NGRIPQGYSV WWGFEDEKLY QFAREDLTKL SKEDKPFAYI
FFTADTHSPH GYADEKCPKL YFEKIHNVYA GASKKAYDFV EWAKTQDFYK NTTIVILGDH
LYMGGDLYLP TVKLKDRHPY NAFINSAKTT DKNKNRLFTT FDLFPTVVES MGIEFNAKGL
GLGRSLFSGE KTLLEEKGLK KLNSEIEKPS IFYEEKLMKK H