Gene TDE0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0098 
Symbol 
ID2741713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp114932 
End bp115651 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content34% 
IMG OID637158968 
Producthypothetical protein 
Protein accessionNP_970715 
Protein GI42525617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.51381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA AAATTATGGT TCTTTTTTGC TTTGTTCTTT TTGTGTTTTC GCTTAATGCT 
TCAGGTGCTG CAGAAACATC TTCTCATGAT GCAATAGGGG GCGCTACCGA AAGCAATTCG 
AAGGCTGAGG TTAAACAAGC TGCCGTTCAT TGTGAGTTAA AAATAGATTT CCCGACTTTT 
GAAGATGTTC CGGCTTTAAA TGCTATCGTG TCAAAAACGG TAAAAGGCAA GGTTACCGCA 
TTTTGGAATA ATTATTATTC CGTTTCTCCC GATGATATGG CAAAATCGTC CACTCCTCAA 
AATTTTGAAC TGATTATAGG TTATGATGAT ATTGTACGGG ATGGAAATTA TATAAGTTTT 
GTTTTATCGG TCTATGAATA TATGGGAGGT GCTCACGGCC TTACATCGTT GGTTCCTATA 
AACTATGATA TAAAAACAAA AAAACTTGTA TCCTTATCTG ATGTTGTACG CCCTGCTTCA 
AAAAACTGGC TTGTCAAGTT GTCGAATGAA GCAAGAAAAA TACTAATGGA AAAGGTTAAG 
AAAGGGGATT TATCGTCTGA TGAGTCGATG ATAAAAGAAG GAACGGAACC TAAACTTGAA 
AATTTTAAAG TTTTTAAAAT CGAAAACGGA AAAATAAAAA TTATTTTTGA GCAATATCAG 
GTTGCTCCAT ATTCAGAAGG ATTGCCTGAA ATTATAATTC CGATAGATTT TTTTAAATAA
 
Protein sequence
MKSKIMVLFC FVLFVFSLNA SGAAETSSHD AIGGATESNS KAEVKQAAVH CELKIDFPTF 
EDVPALNAIV SKTVKGKVTA FWNNYYSVSP DDMAKSSTPQ NFELIIGYDD IVRDGNYISF 
VLSVYEYMGG AHGLTSLVPI NYDIKTKKLV SLSDVVRPAS KNWLVKLSNE ARKILMEKVK 
KGDLSSDESM IKEGTEPKLE NFKVFKIENG KIKIIFEQYQ VAPYSEGLPE IIIPIDFFK