Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0089 |
Symbol | |
ID | 2741704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 106965 |
End bp | 108644 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637158959 |
Product | transglutaminase-like domain-containing protein |
Protein accession | NP_970706 |
Protein GI | 42525608 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.890892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAATA GATTTACTTA TTTATTTAGA AAATATTTTG TTTTTAGGTT TTTTGTATTC CTCCTTCTTT TCTGCGGTCT TGCGGCTCTT ATTTTTTATT TAACATCTTT GACTGCTAAA TATCCTTTGA TAACCGAAAT TAGTCCCCCG ATTGCTCAAG CCGGTGATGA AATTGTAATA ACCGGAGAGC ATTTTGGAAA CGAAGTAGAC TCCTCATGGA TTGAAATCGG AGATGCTATC ATTCAAGCGG AAAATTGTAC TGTCTGGACA GATAAAAAAA TTGTTTTTAA GTATCCTGAA TATCAAAACG GCGGCATAGT ATATGTTGTT GTACAAAATA AAAAATCTTT GCCTTCATTT ATGGCTTCAG TTGAATCAAT GCCTGTAATA AAAGATAAGG CTCATTCGGG CGGAATTCCT TCAATAATTG CTTTAAACAA GGATTTTGCC GAGGTAGGAA GCATTATAAA AATTTCAGGT GAAAATTTTG GGGAGACAAG GGGAAGCTCC CAAGTTTTGT TTGTATCCGA TTTTAATGCT TCAATGATTG AACAAGTTGA AAAAAAAGAA GAGATAGAGG CTGCCCGTTG TTCGGACTAT GATTACGATT TTGTGTTTTG GTCAAATCAG GAGCTTCACG TAAGGGTTCC GGATGGAGCG GATTCCGGAA TGCTTTTGGT TGTAACGTCT TCCGGAGCCA GCAACTCTGT TCCTTTTAGA GTCAAAAACA AGATAGGTAC AAAGACTTAT TCAAACAAAA AGAATTTTAC AATTGCTGCC GAGGTTGATA TTTCAAATGT AGAGGCTGTA GAAAAAAATT CTCTTTTTAT AAAGGTTCCG CTTCCGATTC AATCCTATTC GCAGAGAGAT GTTAAGGTTT TGTCTATTAA TCCCACTCCT TTTGTAGCCG ATTATCAGGG GGCTGCCATC CATCAGTATG AAAATATAAA TTCTTCTACA AAAATTCACA TAAGACAAGA GTATGGCGTA AACACCTATG AGGTAAATAC AAGGATTAAT CCCGTTAATG TAAGAGTTAA CTCCCGTCAA AACAAGGCTA TCTATGATAA TTATGCTATT GCTACCGAGT TAATTCCGGC GAATGATCCT CTTATTCAAA AAACGGCAGC CGAAATTGTT CAAAATGAAA GAAACCCTTA TAACAAGGCA AGACGCATAT ATAATTATTT ATTAAAAAAT GTCGAAATAA TTCCGGCTTC AATATTGAAT TCCGGGGCTT CGCCTGTAAA TGCATTAAAA GAAAAAAAGG CCGATACCTA CGATATAGCT ATTTTGTTTG CGGCTCTTGC AAGAGCTGCC GGTATACCCG CTCAGCCTAT TGCCGGAATC ATTGCAGATG TTTCTCAAAC AAGTTATCTT CACTGGTGGG CAGAGTTTTA TCTGGAAGGC TTCGGATGGA TACCTGTAGA CCTCGGTTTA GCAAAGTCAG TTCCCTTCGA TATGGGTGTT TCTCAAAGTG AAGGCTGGTA CTTCGGTAAT TTGGATGCTT TTAGGGTCGC ATTTTCCCGA GGTGAGAATA TTCAGCCGCC GATGGCATCT AACAGTACAA TGGTATCAAA AGAAAGAAGT TATGCCTTTT ATAACGGCTG GGAAGAGTAT TCCGGTCTTA CAAAATATAA TTCCGTTTGG AGAATTCCGA ACGTAATCGC TATTTACTAA
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Protein sequence | MGNRFTYLFR KYFVFRFFVF LLLFCGLAAL IFYLTSLTAK YPLITEISPP IAQAGDEIVI TGEHFGNEVD SSWIEIGDAI IQAENCTVWT DKKIVFKYPE YQNGGIVYVV VQNKKSLPSF MASVESMPVI KDKAHSGGIP SIIALNKDFA EVGSIIKISG ENFGETRGSS QVLFVSDFNA SMIEQVEKKE EIEAARCSDY DYDFVFWSNQ ELHVRVPDGA DSGMLLVVTS SGASNSVPFR VKNKIGTKTY SNKKNFTIAA EVDISNVEAV EKNSLFIKVP LPIQSYSQRD VKVLSINPTP FVADYQGAAI HQYENINSST KIHIRQEYGV NTYEVNTRIN PVNVRVNSRQ NKAIYDNYAI ATELIPANDP LIQKTAAEIV QNERNPYNKA RRIYNYLLKN VEIIPASILN SGASPVNALK EKKADTYDIA ILFAALARAA GIPAQPIAGI IADVSQTSYL HWWAEFYLEG FGWIPVDLGL AKSVPFDMGV SQSEGWYFGN LDAFRVAFSR GENIQPPMAS NSTMVSKERS YAFYNGWEEY SGLTKYNSVW RIPNVIAIY
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