Gene TDE0054 details

Gene Information

• Locus tag: TDE0054
• Symbol: flhB
• ID: 2741669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 62524
• End bp: 63696
• Gene Length: 1173 bp
• Protein Length: 390 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637158924
• Product: flagellar biosynthesis protein FlhB
• Protein accession: NP_970671
• Protein GI: 42525573
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1377] Flagellar biosynthesis pathway, component FlhB
• TIGRFAM ID: [TIGR00328] flagellar biosynthetic protein FlhB

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATCGG GAAAATCGCC CCTCCTTTAC CGAAAATATT TTTCTCAAGA AGATCTCCTC 
CTCAATAAAA CGATAGGCTT GCAATGGTTC GCTGCCGAAG ATGAAGGCAG AACGGAAGAC 
CCGACCGAAT ATAAGATACG CAAGGCCAGG GAAGAAGGAA GGGTTGCAAA AAGTCAGGAC 
TTAAATGCTG CAATGGTTGT GCTGCTTCCC GTAATCAGCC TTATAATAAT GGGGCCCTAC 
ATATTTAAAT CTTTAATGCA GGTCATCGCC TTCTTTTTTG AACGCTGCAC AACAGAAGAT 
GTTGTAAACG GAACTTGGTT CAGGATTTTT GTTTTATACT TTTTTAAAAC GGTTTTCCCG 
ATAACGGGGG TAGCCCTAAT TTCGGGAGTG TTGGGAAATA TTATTCAAAA CAGAGGCTTT 
TTATTTTCGA CAAAACCTAT TCAGCCCGAT TTTAAAAGAG TTACTCCCAA TTTTGCAAGG 
TTCTTTAAAA GAGCTCTATT TTCTGCCGAA GGGCTTTTTA ATTTAGCCAA ATCGCTTTTT 
AAGGTTGTCA TTATAGGTTT TATAGGATAT CTTGTTATAA AAAACAATAT TACAAAGATG 
ATAGCCCTGC TTCAATCCGA TTTTCCCAAT TCGATAATTT TTATAGCAAA AACGGCGGCG 
CAAATATTGG TCTACGCCGC AGTCGCACTA GTTCTTTTAA GTATTCCCGA CTACTTTTTT 
CAAAAACGTC AGTTTTCGGA ATCTTTAAAA ATGTCAAAAA CGGAAGTAAC CGATGAATAC 
AAAGAATTGG AAGGCGACCC GATGGTAAAG GCCCAAATAA ACAGGCAGAT GCAGGCAATC 
TTGCAAAAAA CCGGTATAAA AAACGTTCCG GACGCCGATG TTGTTATTAC AAACCCTACC 
CATTATGCTG TTGCTCTTCA ATGGAAACAA GGCATCATGC CTGCTCCTAT GGTTATATCG 
AAGGGAGTTG ATGCAACAGC CCAAAACATA AAAAGAATTG CCCGGGAAAA CAATATTCCT 
ACGATTGAAA ATGTTCCCCT AGCCCGAGCC CTTTACGCTA ACGTAGATTT AGGACAGATA 
ATTCCAAGCG AGTACTATCA ATCGCTTTCG ATTATTTTCT TAAAAATTTA CTCGATGAAA 
GAAAAAGAAA TGTTAAGGAA AAGATGGAGG TAA 

 

Protein sequence

MISGKSPLLY RKYFSQEDLL LNKTIGLQWF AAEDEGRTED PTEYKIRKAR EEGRVAKSQD 
LNAAMVVLLP VISLIIMGPY IFKSLMQVIA FFFERCTTED VVNGTWFRIF VLYFFKTVFP 
ITGVALISGV LGNIIQNRGF LFSTKPIQPD FKRVTPNFAR FFKRALFSAE GLFNLAKSLF 
KVVIIGFIGY LVIKNNITKM IALLQSDFPN SIIFIAKTAA QILVYAAVAL VLLSIPDYFF 
QKRQFSESLK MSKTEVTDEY KELEGDPMVK AQINRQMQAI LQKTGIKNVP DADVVITNPT 
HYAVALQWKQ GIMPAPMVIS KGVDATAQNI KRIARENNIP TIENVPLARA LYANVDLGQI 
IPSEYYQSLS IIFLKIYSMK EKEMLRKRWR