Gene PG2201 details

Gene Information

• Locus tag: PG2201
• Symbol: def
• ID: 2551853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2308933
• End bp: 2309502
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637150764
• Product: peptide deformylase
• Protein accession: NP_906244
• Protein GI: 34541765
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTCCTTC CTATCTACCT ATACGGACAT CCGGTGCTGA GAAAAGTAGC AGAAGATATA 
ACTCCGGACT ATCCCAAACT GAAAGAGCTG ATAGCCAACA TGACGGAGAG CATGTACCAC 
TCCGACGGCA TTGGCCTGGC AGCTCCTCAA ATAGGCTTAC CCATCAGGGT ACTCGTGATC 
GATGCCGATC CGCTGAAAGA GGATTATCCC GAATGTGCCG GATTCAAGCG CGTGATGATC 
AACGCCCATA TCGAAGAGCG AGGCGAAGAT CTCTGCACCG AATACGAAGG TTGCCTCAGC 
CTTCCGGCCA TACACGAGAA GGTGGAACGC CCCACCTCCA TCCGTATTCG CTATGTGGAC 
GAGGACTTTC AGCCGCACGA AGAGGTGCTC CAGGGCTTTG CGGCAAGAGT GGTACAGCAC 
GAATACGACC ATATCGACGG GAAGCTCTTC ATCGACCACA TCAGTCCGAT ACGCAAGCAG 
CTGATCAAAG GGAAGCTGCA GAATATCATC AAAGGCAAAG TACGGACTTC GTACCGCGTA 
GTGACAGCTC CGACCGGCAA AAAACGGTAA 

 

Protein sequence

MLLPIYLYGH PVLRKVAEDI TPDYPKLKEL IANMTESMYH SDGIGLAAPQ IGLPIRVLVI 
DADPLKEDYP ECAGFKRVMI NAHIEERGED LCTEYEGCLS LPAIHEKVER PTSIRIRYVD 
EDFQPHEEVL QGFAARVVQH EYDHIDGKLF IDHISPIRKQ LIKGKLQNII KGKVRTSYRV 
VTAPTGKKR