Gene PG2188 details

Gene Information

• Locus tag: PG2188
• Symbol: lysA
• ID: 2551374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2294723
• End bp: 2295871
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637150756
• Product: diaminopimelate decarboxylase
• Protein accession: NP_906236
• Protein GI: 34541757
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0019] Diaminopimelate decarboxylase
• TIGRFAM ID: [TIGR01048] diaminopimelate decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAACAC CTTTCTATTT TTATGATCTG ACACTCTTGG AGAGGACGCT TTCCGCGCTC 
GCCCGGAGTG CAGGAAGGCA CGATGTTGCC ATTCACTATG CGCTCAAGGC GAACAATCAT 
CCTCGTATTT TGCAGACGGT TGCAGCTGCC GGCTTCGGGG CGGACTGTGT GAGTGGAGGG 
GAGATCGAAG CGGCTATCGA GGCAGGCTTT CCCGCTTCCG ATATTTTTTT TGCCGGAGTA 
GGCAAAAGCG ATGAAGAGAT TTTGCTTTCT TTAGAGGCGC GGATAGGTGC TTTCGTAGTA 
GAGAGTGTGC CCGAATTGCT GAACATCGAA CGATTGGCCG GATCGAAGAA CGACATCGCT 
CCGATATTGC TTCGGCTCAA TCCTGAGGTC GATGCGCATA CGCACAGCCA TATAACGACA 
GGATTGGCAG AAAACAAATT CGGTCTTTTG CCCGAAGATG CACTTGCACT GATGCCCCAC 
CTTTTACAGT CCGGATCGCT GGTATGGAGA GGATTGCACT TCCATATTGG ATCGCAGATA 
CGGTCAGCCA AGGTTTTTGA GAAGCTATGC GAAAAGACCA ATCGCATCCT TGCTTCTTTC 
CGTACGGCCG GCTATTCCCC TGACATTATA GATATGGGAG GCGGGCTTGG TATCAATTAT 
GACGAGCCGG AGGCCGAACC GATACCTGAT TTTGCCACTT ATATCGAGCG GTATCGACGG 
ATGATAGAGA CCGGTGAGGC TCGGCTGCAT ATCGAACCCG GGCGTTCGGT GGTGGCACAA 
TGCGGCAGTC TGATTACTCA AGTGCTGTAC ATCAAAGAAG GAAAGGCAAA AAAGTTTGCC 
ATAGTGGATG CCGGTATGAC CGACCTCGTC CGTCCGGCTT TGTATGAGGC GCATCACCAA 
ATCCGGTTGG TGCAACCCGG AGAATGGACG ATGCGTGCGA CTTCTCCCTC AGCGGCTCTG 
ACAGAGAAAT ACGATGTTGT CGGCCCTATC TGCGAATCCA GCGATGTATT CGAGCGTGAA 
TTGCTCATGC CCGAACTCAA ACGCGGCGAT TATCTGGCTA TTCGTTCGGC CGGAGCATAT 
GGAGCCGTGA TGGCTTCTTC CTATAATATG CGTCCGCTAC CGGGAAGTCT TTTCTCAGAT 
GAGCAATAA 

 

Protein sequence

MKTPFYFYDL TLLERTLSAL ARSAGRHDVA IHYALKANNH PRILQTVAAA GFGADCVSGG 
EIEAAIEAGF PASDIFFAGV GKSDEEILLS LEARIGAFVV ESVPELLNIE RLAGSKNDIA 
PILLRLNPEV DAHTHSHITT GLAENKFGLL PEDALALMPH LLQSGSLVWR GLHFHIGSQI 
RSAKVFEKLC EKTNRILASF RTAGYSPDII DMGGGLGINY DEPEAEPIPD FATYIERYRR 
MIETGEARLH IEPGRSVVAQ CGSLITQVLY IKEGKAKKFA IVDAGMTDLV RPALYEAHHQ 
IRLVQPGEWT MRATSPSAAL TEKYDVVGPI CESSDVFERE LLMPELKRGD YLAIRSAGAY 
GAVMASSYNM RPLPGSLFSD EQ