Gene PG2088 details

Gene Information

• Locus tag: PG2088
• Symbol: msrA
• ID: 2551523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 2187665
• End bp: 2188723
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637150666
• Product: bifunctional methionine sulfoxide reductase A/B protein
• Protein accession: NP_906149
• Protein GI: 34541670
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0225] Peptide methionine sulfoxide reductase; [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00357] methionine-R-sulfoxide reductase; [TIGR00401] methionine-S-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGTATC TTTCTCTTAT TCTTATCAGT ATGGCTTCTT TTAGTTTTTC TCTTAGTGCC 
GGTAGTTGCT CTTCTTCGGC AAAGCATAAT GACAGTATTC CCGAGACGAA GACAATATAC 
TTTGCCGGTG GGTGCTTCTG GGGTACCGAG CATTTCTTCA AACAAGTGCG TGGTGTCGTG 
GCTACCGAAG TCGGGTATGC CAACGGCAAT GTCGAGGATC CTTCGTATGA AGAGGTCTGT 
TCCCAAACCA CAGGATTTGC CGAGACGGTA AGAGTCGAAT ATGATCCGAG TGAGCTATCG 
CTCTCTCTGC TGCTCGATCT TTTCTTCAAG ACCATAGATC CTACAATCCT CAATAGACAG 
GGGAACGATG TCGGCTCTCA GTATAGAACG GGTATCTATT ACACGGATCA AGAAGATCTC 
TCTCTCATTT CGTCCGCACT AAGTGCATTG GCTACGAAAT ACGATCGACC CATTGTTGTC 
GAGAATGAGC CGCTCAAGAA CTTCTATCCT GCGGAAAACT ATCATCAAGA CTATTTGGAT 
CATAACCCTC GCGGTTATTG TCATATCGAT CCTTCTTTAT TCGAATTGGC GAGGAAAGCC 
AATCCGGCCA GATTCTACAA GAAGGCCGAT GATGCAGAGC TTCGTGCCCG GCTTACCCCC 
GAGCAGTATG CCGTCACACG CAACAATGCC ACCGAACCGG CTTTTGACAA CGAGTATTGG 
AATGAATTTC GAGAAGGTAT TTATGTCGAT GTTACTACAG GTGAACCGCT ATTTCTTTCT 
ACTGATAAGT TCGACTCCGG CTGTGGATGG CCGAGTTTCA GCAAGCCGAT AGGGAAAGAG 
CTGATTTCCG AGCGTATCGA TCGTTCTTTC GGAATGACTC GTACAGAAGT GCGTAGTACG 
ACCGGCGATG CCCATTTGGG ACACTTGTTC AATGACGGGC CACTGGAGAA AGGCGGACTC 
CGTTATTGCA TCAATAGTGC CTCCCTTCGG TTTATTCCCA AAGAGGATAT GAAGAAAGAA 
GGCTATGGCA GTCTTCTTCC TCTTTTGAAC AAACGATGA 

 

Protein sequence

MKYLSLILIS MASFSFSLSA GSCSSSAKHN DSIPETKTIY FAGGCFWGTE HFFKQVRGVV 
ATEVGYANGN VEDPSYEEVC SQTTGFAETV RVEYDPSELS LSLLLDLFFK TIDPTILNRQ 
GNDVGSQYRT GIYYTDQEDL SLISSALSAL ATKYDRPIVV ENEPLKNFYP AENYHQDYLD 
HNPRGYCHID PSLFELARKA NPARFYKKAD DAELRARLTP EQYAVTRNNA TEPAFDNEYW 
NEFREGIYVD VTTGEPLFLS TDKFDSGCGW PSFSKPIGKE LISERIDRSF GMTRTEVRST 
TGDAHLGHLF NDGPLEKGGL RYCINSASLR FIPKEDMKKE GYGSLLPLLN KR