Gene PG2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG2054 
Symbol 
ID2552033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand- 
Start bp2151433 
End bp2152104 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID637150629 
Productlipoprotein PG3 
Protein accessionNP_906118 
Protein GI34541639 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0950809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CAAGTGTAGT AGCCTCAGTT TTGGCCGTGG CTCTCGTGTT CGCCGGTTGC 
GGACTGAACA ATATGGCAAA AGGCGGCCTT ATCGGCGCCG GAGTAGGAGG TGCCATTGGT 
GCCGGAGTAG GTAACGTAGC CGGAAATACG GCTGTCGGTG CCATCGTCGG TACTGCAGTC 
GGTGGAGCAG CCGGTGCTCT CATCGGAAAG AAGATGGACA AGCAGAAAAA AGAACTGGAG 
GCCGCAGTAC CCGATGCTAC GATTCAGACA GTAAATGACG GAGAGGCTAT TCTGGTTACT 
TTCGATAGCG GTATCCTCTT TGCGACGAAC TCCAGCACTC TGAGTCCCAA CTCACGCACT 
GCGCTGACGA AGTTTGCTGC AAACATGAAC AAAAACCCCG ACACGGATAT TCGTATCGTA 
GGCCATACGG ACAATACCGG CTCCGACAAG ATCAACGATC CTCTGTCTGA GAGACGTGCA 
GCCAGCGTAT ATTCTTTCCT GAATTCTCAG GGTGTGAGTA TGTCGCGCAT GGCAGCCGAA 
GGGCGTGGGA GCCATGAACC GGTTGCAGAC AATAGCACAG TTGCCGGACG TTCGGCCAAC 
CGCCGTGTGG AGGTTTATAT CTTGCCGAAT GCCAAGATGA TCGAACAAGC ACAGCAAGGT 
ACGCTGAAGT AA
 
Protein sequence
MKKSSVVASV LAVALVFAGC GLNNMAKGGL IGAGVGGAIG AGVGNVAGNT AVGAIVGTAV 
GGAAGALIGK KMDKQKKELE AAVPDATIQT VNDGEAILVT FDSGILFATN SSTLSPNSRT 
ALTKFAANMN KNPDTDIRIV GHTDNTGSDK INDPLSERRA ASVYSFLNSQ GVSMSRMAAE 
GRGSHEPVAD NSTVAGRSAN RRVEVYILPN AKMIEQAQQG TLK