| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2029 |
|---|
| Symbol | |
|---|
| ID | 2552084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 2126683 |
|---|
| End bp | 2129262 |
|---|
| Gene Length | 2580 bp |
|---|
| Protein Length | 859 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637150607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_906096 |
|---|
| Protein GI | 34541617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00240601 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA GAATCTTTAC TGCGTGCATG GCTGTCGCCT GCATCCTGCC CGTTTTCAAG
GCTGAAGCAC AGAGCGATTA CTTCTTTCGC TCGAAAAAAA AGAAGCCCGC AACGGAAGCT
CCGGCTCAGA AATCCAAATT CGATCAGACC GTAGCCGGTG CCAAAAAGAG CGAAGGCCCT
TTCACCGTTT ATTTCACCAA GAAGAATGAG ATCCTGTTCG CCATGCCCGA CTCCGCATTC
CGTCGGGAGT ATCTCCTCAG CAGCCGTGTG GCCGCTACGA GCAATACGCG CGAAGCCGTG
GCCGGACAGA TGAGCACGTC TCCTTTCCTG ATCAAGTTCT CACGTGACAG TATCAATGTC
TATCTCCATA CGCCTCAGGT AGGAGCTATG GTCAGAGAAG ACGATCCTAT CGTACCTTCA
TTCAAGAAGA ACTTCTTCGA CCCCGTTCTC AAGGCATTCC CCATCGTGGA TACAAAAGAC
GGCAAGGTGC TGATCGACGT AACCAAATTT TTCCGCGAAG ACGAGAAGAG CATCACGCCT
CTGACGATCC TGCCACCCAC GATGCAAAAT GCCAATGTAA TCAAGGGCAT GCTCGACCCG
ACGGCCAGTA TCGTGACGGA AGTCAAGAGC TTCCCCCGAA ACGTGGAGAT CAAGAGTATG
CTCACCTACA AGACTCAGCC CTATTCCGAG CCCTACACCC TGATCATGCA ACGCTCCATC
CTGCTCCTCC CCGAGAAACC GATGCGTATG CGTTTGCAGG ACAATCGTGT CGGGATATTC
AATTCCTCTC GCCAATACTT CAGCACCGAT AAAGACAAAG TGGAGTCTTT CAAGTTGATC
CATCGCTGGG ACCTCCAGCC CAAGGATAGT GCGGCCTATA TGCGTGGCGA ACCGGTAGAG
CCCGTGAAGC CTATCGTTTT CTATGTGGAC TCCGTCTTCC CCGACAAATG GCGTGCTACT
ATCAAGCAGG CTATCGAAGA CTGGCGTATG GCTTTCGAAG CAGCCGGCTT CAAGAATGCC
ATCATCGCCA AGGACTATCC TACGAAGGAG GAAAATCCCG ATTTCGATCC GGACGACATT
CGCTTCAGCT GTTTCAAATA TGCCACAACG ACCACGGCCA ACGCCATGGG GCCGAGTTTC
GTAGACCCGC GAAGCGGCGA GATCATTTGT GCAGATGTGA TCTGGTATCA CAATGTATTG
TCTCTCGTTC ACAACTGGCG TTTCGTACAG ACGGGAGCCG TGGATCCGCG TGTTCGCAAG
GCTGTATTCG ACGATGAAGT GATGCGCGAA TCGCTCCGCT ATGTGGCAGC TCACGAGATC
GGTCACACCA TCGGCCTGAT GCACAACATG GGTGCCAGCT ACTCGTTCAC CATCGAGAAC
CTGCGCGATC CGCAGTTCAC CCAAAAATAC GGTACCACAC CGAGTATCAT GGACTATGCC
CGCAACAACT TTGTGGCGCA GCCCGGCGAC TTGGAGCGTG GTGTACGCCT GACGCCTCCC
ATCATCGGTG TGTATGACAT TCATGCCATC AACTGGGCTT ATCGTCTCGT GCCCGGAGCC
AAAACGGCTG AAGAGGAAAA GCCGACACTG AACGCTTGGA TCGCCGAGAA GAAAGACGAT
CCCATGTTTA CCTTCGGAGC ACAGCAGTTC CCCTATACCA TCGACCCCAC GGATCAGACC
GAGGATCTCA GTAACGATCA CTTCCGTGCC GGCGACATGT CCATCAGCAA CCTGAAGATT
ATCGCCAAGA ACATGGACAA ATGGCTCCTC GAAAAGGAAG CTCGCTACGA TGATCTGCGC
GACATGCACG GACAGCTCAT GTCCCAATAC TACCGCCATG TGAGCCACAT CATGCCCTAT
ATCGGAGGAG TGGAACACTT CGAAATCCGC CAGGGCGAAG AGAATACGCT TTCCCGTCGC
TTCATCACAA AAGACAAGCA ACGCAAGGCC ATGAATTGGC TCCTCAATCA GGCTCGCACA
TACCGCCAGT GGCTGGCCGA ACCGGCTTTC CTCAACAAGG TAGAGCAGAA CTCTGGGATG
ACCGACCTCT TGGGCAAGGC CATGGTGGCG GCTCTCTTCA ACCCCGGTAG CATAGGACGC
ATATACGAAG CAGAGCAGTC CGGACAACCG GGTGTGTACA AGCTCACGGA TTACGCCAAC
GAGCTGATCG ATGCCATCTT CAACGTGAAG GGCAATCTGA CCGATGCCGA TCGTTCTATT
CAGAACCTGG CCATCGACCT CATGTCGGCC CATAGTGGTC TCTCCACGGA AAGCAAGAAT
ACGGCACGCC GTCTGTCCGA AGAGCTGGAT GCCCTGTCGC ACAAGCTCAG CGAGGACAAC
CTCCCATGTG CTCTCGGTTG TGGCGGTCAC CACGCGGCAG AGGACGGAGC CGATTCCTTC
TTCCGTCTTA CGGCCTTCTC CAAGCAGGCC CCGAATGAAG TGATTGCACC CCTCCTACTG
CAACAACTCA AGCGCGTGCA GACCATCTAT CGCAATCGCA AGGCCACGGG CAACGCTGCC
GACCGCTCGT TCTACGACTA TCAACTGCTC CGTCTGGAAC GCCTGATGAA GACCAACTAA
|
|---|
| Protein sequence | MNKRIFTACM AVACILPVFK AEAQSDYFFR SKKKKPATEA PAQKSKFDQT VAGAKKSEGP
FTVYFTKKNE ILFAMPDSAF RREYLLSSRV AATSNTREAV AGQMSTSPFL IKFSRDSINV
YLHTPQVGAM VREDDPIVPS FKKNFFDPVL KAFPIVDTKD GKVLIDVTKF FREDEKSITP
LTILPPTMQN ANVIKGMLDP TASIVTEVKS FPRNVEIKSM LTYKTQPYSE PYTLIMQRSI
LLLPEKPMRM RLQDNRVGIF NSSRQYFSTD KDKVESFKLI HRWDLQPKDS AAYMRGEPVE
PVKPIVFYVD SVFPDKWRAT IKQAIEDWRM AFEAAGFKNA IIAKDYPTKE ENPDFDPDDI
RFSCFKYATT TTANAMGPSF VDPRSGEIIC ADVIWYHNVL SLVHNWRFVQ TGAVDPRVRK
AVFDDEVMRE SLRYVAAHEI GHTIGLMHNM GASYSFTIEN LRDPQFTQKY GTTPSIMDYA
RNNFVAQPGD LERGVRLTPP IIGVYDIHAI NWAYRLVPGA KTAEEEKPTL NAWIAEKKDD
PMFTFGAQQF PYTIDPTDQT EDLSNDHFRA GDMSISNLKI IAKNMDKWLL EKEARYDDLR
DMHGQLMSQY YRHVSHIMPY IGGVEHFEIR QGEENTLSRR FITKDKQRKA MNWLLNQART
YRQWLAEPAF LNKVEQNSGM TDLLGKAMVA ALFNPGSIGR IYEAEQSGQP GVYKLTDYAN
ELIDAIFNVK GNLTDADRSI QNLAIDLMSA HSGLSTESKN TARRLSEELD ALSHKLSEDN
LPCALGCGGH HAAEDGADSF FRLTAFSKQA PNEVIAPLLL QQLKRVQTIY RNRKATGNAA
DRSFYDYQLL RLERLMKTN
|
|---|
| |