Gene PG1938 details

Gene Information

• Locus tag: PG1938
• Symbol: rplC
• ID: 2552196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2024226
• End bp: 2024843
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637150530
• Product: 50S ribosomal protein L3
• Protein accession: NP_906020
• Protein GI: 34541541
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCAGGTT TATTAGGAAA GAAAATCGGA ATGACATCCG TATTCAGTGC CGAGGGCAAG 
AATCTGCCAT GCACTGTTAT CGAAGTTGGT CCTTGTGTGG TTACGCAAGT AAAGACTTTG 
GAGAAAGACG GCTATAGCGC ATTGCAGCTT GGTTTTGTGG ATGCAAAGGA AAAGCATACG 
ACAAAACCTT TGGCCGGCCA TTTCAAGAAA GCTAATGTAG CCCCCAAGAG ACACTTGGCC 
GAGTTCAAGA ATTTCGAAGG CGAGCACAAG CTCGGCGACG TATTGAACGT AGAGTTCTTT 
AGCGATGCCG ACTTTGTCGA TGTAGTGGGA ACATCTAAAG GAAAAGGTTT CCAAGGTGTA 
GTAAAACGCC ACGGTTTCGG TGGTGTGGGT CAGGCTACAC ACGGTCAGCA CAATCGTTTG 
CGTGCTCCCG GTGCAGTCGG AGCCTGTTCG TATCCTGCCA AAGTGTTCAA AGGAACGCGT 
ATGGCCGGTC AGATGGGTAA CGAGCGCGTG ACCGTGCAGA ATCTGGAAGT TATTAAGGTG 
ATGCCCGAGC ACAATCTGCT CCTTGTGAAA GGTAGCGTGC CCGGTGCTAA AGGTTCAATC 
TTGTTAATTG AAAAGTAA 

 

Protein sequence

MPGLLGKKIG MTSVFSAEGK NLPCTVIEVG PCVVTQVKTL EKDGYSALQL GFVDAKEKHT 
TKPLAGHFKK ANVAPKRHLA EFKNFEGEHK LGDVLNVEFF SDADFVDVVG TSKGKGFQGV 
VKRHGFGGVG QATHGQHNRL RAPGAVGACS YPAKVFKGTR MAGQMGNERV TVQNLEVIKV 
MPEHNLLLVK GSVPGAKGSI LLIEK