Gene PG1921 details

Gene Information

• Locus tag: PG1921
• Symbol: rpsE
• ID: 2551559
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 2016593
• End bp: 2017111
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637150513
• Product: 30S ribosomal protein S5
• Protein accession: NP_906003
• Protein GI: 34541524
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTATTG TATATAATCG AGTAAAATCG ACAAACGATC TGGAATTGAA GGATCGCTTG 
GTTGCAATCA ATCGTGTGAC CAAGGTTACA AAAGGTGGGC GCACCTTTAC TTTTGCTGCT 
ATTGTTGTCG TAGGTAATGA AGACGGTGTT ATCGGCTGGG GCCTTGGAAA AGCCGGTGAA 
GTGCCTGCTG CCATAGCAAA AGGGGTTGAG GCTGCTAAAA AGAATTTAAT CCGGGTTCCG 
GTGCATAACG GTACAATCCC TCACGAACAA GCTGCTTCTT ATGGTGGAGC CAGTGTGTTT 
TTGAAGCCCG CGACCACCGG TACCGGAGTA AAGGCTGGGG GTGCCATGCG TGCTGTCTTG 
GATAGCGTTG GCGTTACTGA TGTCCTTGCA AAAAGCAAAG GCTCTTCTAA TCCTCACAAT 
CTTGTAAAAG CAACGATTCA AGCCCTTGCA GAAATGCGTA GCCCTTTGAT GGTTGCACAG 
AACCGAGGTA TTTCTGTTGA AAAAGTTTTC AAAGGTTAA 

 

Protein sequence

MAIVYNRVKS TNDLELKDRL VAINRVTKVT KGGRTFTFAA IVVVGNEDGV IGWGLGKAGE 
VPAAIAKGVE AAKKNLIRVP VHNGTIPHEQ AASYGGASVF LKPATTGTGV KAGGAMRAVL 
DSVGVTDVLA KSKGSSNPHN LVKATIQALA EMRSPLMVAQ NRGISVEKVF KG