Gene PG1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1897 
Symbol 
ID2551674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand- 
Start bp1996143 
End bp1996820 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID637150492 
Productthiamin pyrophosphokinase catalytic subunit 
Protein accessionNP_905982 
Protein GI34541503 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.327287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCT TTCCCTCGCT TACTCCGGAG ACAGCTCCGC TTTTTGTTAT TCTGGCTAAG 
GGGGAATTTC CCCGTAAAAT CCTCCCCCTT GCTATCCTCC GGCGAGCATC GGAGCATCCT 
GAAGGTACCA TCGTCTGTTG CGATGGAGCC ATACAGAATT TGCTGGACTA TGGTGCAGAG 
CCGGATGCAG TAGTGGGCGA CTTGGATTCT TTTACAGCCT CGCGACATAT TTTGCCTGCA 
GAAAAACTAC ATCGCATAGA CGAGCAGGAT ACCAATGATC TGACGAAGAC AGTTACATTC 
TCTGCCGAGA CCTATTCCCC TCGCGAGGTC TGTCTGCTGG GGACATCGGG GCGTCGTGAA 
GATCATTTTG TCGGCAATCT GGCACATCTG CCCGGATATA CCCGCTTTTT CGAAAAGATC 
GTGATGCCTA CGGATTACGG ATGTTTTTTG GCTTTTAACG GGGAGGCTCG CATAGAAGTG 
GAGCGAGGGA GACAAATTTC TATATTCAGT TTCAGCGGAT CAGCCGTCAC GGCCGAAGGG 
CTGAAATGGC CGCTTCGCAA TACCACTCTG CCGGAGTTGT GGTGCGGAAC GCTCAACGAG 
GCAGTGAGCG ATACGATCTA TCTATCCTCT GCTGCCCCGT TGGTCGTCTT TGTAGCTGAT 
GAAGTGAAAA ACCGGTAG
 
Protein sequence
MIFFPSLTPE TAPLFVILAK GEFPRKILPL AILRRASEHP EGTIVCCDGA IQNLLDYGAE 
PDAVVGDLDS FTASRHILPA EKLHRIDEQD TNDLTKTVTF SAETYSPREV CLLGTSGRRE 
DHFVGNLAHL PGYTRFFEKI VMPTDYGCFL AFNGEARIEV ERGRQISIFS FSGSAVTAEG 
LKWPLRNTTL PELWCGTLNE AVSDTIYLSS AAPLVVFVAD EVKNR