Gene PG1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1875 
Symbol 
ID2551780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1969737 
End bp1970711 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content50% 
IMG OID637150472 
Producthemolysin 
Protein accessionNP_905962 
Protein GI34541483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCG AACCCATAAT TGCTCCGATT TCATCCGAGT TGCTCGAGCA GGAGCTGACT 
GCCGATCGTT TTCTGCGGAT GACAAACAAA GCCGGCAATG AGATCTATGT TTTTACGGCC
GAAGAAGCTC CGCATTGCAT GAAAGAAGTA GGCCGACTGC GAGAAGAAGC CTTTCGGCAT
TATGGCGGAG GTACTGGCAA GGCGATCGAT ATAGACGAGT TCGACACCAT GCCCGGGAGC
TACAAACAGC TGATCGTATG GGATCCGCAA AACAAGGCTA TACTCGGAGG CTACCGCTTT
ATCTATGGGC GGGACGTTGC TTTCGATACC GATGGCAAGC CTTTGCTGGC AACGGCAGAG
ATGTTTCGCT TCAGTGATGC TTTTTTGCAC GATTATCTCC CCTACACAGT CGAATTGGGA
CGTTCGTTCG TGTCGCTCCA GTACCAATCG ACACGGATGG GCACAAAGGC CATTTTTGTG
CTGGACAATC TTTGGGACGG TATCGGAGCA CTCACTGTAG TCAATCCAGA GGCACTCTAT
TTCTATGGCA AGGTGACCAT GTACAAAGAC TATGATCGGC GAGCTCGCAA TCTGATCCTG
TATTTTCTTC GCAAGCACTT CTCCGATCCG GAAGGCTTGG TCAAGCCTAT TCATCCCCTA
CCGATAGAGA TCAGTGCGGA GGACGAAGCC TTGTTCTCCT CATCCGACTT TGACACCAAT
TACAAGACTC TCAATATAGA AGTGCGCAAG CTGGGTATCA ATATCCCTCC TCTCGTGAGT
GCATATATAG CTTTGTCTCC GGAGATGCGT GTTTTCGGCA CTGCAGTGAA TGAGTCTTTC
GGAGAGGTGG AGGAAACCGG CATATTCATT GCTGTGGGTA AGATCCTGGA AGAGAAAAAA
CAACGGCACA TAGAGAGCTT CATCCTCAGC CGGAACGAAA AAAAAGGTCT CGACAGTAGC
AATGGCCGAT CATAA
 
Protein sequence
MCLEPIIAPI SSELLEQELT ADRFLRMTNK AGNEIYVFTA EEAPHCMKEV GRLREEAFRH 
YGGGTGKAID IDEFDTMPGS YKQLIVWDPQ NKAILGGYRF IYGRDVAFDT DGKPLLATAE
MFRFSDAFLH DYLPYTVELG RSFVSLQYQS TRMGTKAIFV LDNLWDGIGA LTVVNPEALY
FYGKVTMYKD YDRRARNLIL YFLRKHFSDP EGLVKPIHPL PIEISAEDEA LFSSSDFDTN
YKTLNIEVRK LGINIPPLVS AYIALSPEMR VFGTAVNESF GEVEETGIFI AVGKILEEKK
QRHIESFILS RNEKKGLDSS NGRS