Gene PG1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1853 
SymboldnaN 
ID2551836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1952076 
End bp1953209 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content50% 
IMG OID637150453 
ProductDNA polymerase III, beta subunit 
Protein accessionNP_905943 
Protein GI34541464 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG AAGTAGCCAG CAACGTCCTG TTGCAACACT TGCAATTGAT TGCCCGCGTC 
ATAGCTTCAC GCAGTACACT TCCAATTTTG GAGTCTGTAC TTTTCGAGCT TGAGGGAGAT
CAATTACGTC TTACCGCTGC CGATATGGCC AATCGGATGA GTACGGAACT TACCGTGAAC
AACGTAGGGG GCGAAAACGG TTCTTTCGCC GTTCCCGAGA GGATCTTACT TGAACCACTG
AAAGAATTGC CCGATCAGCC GATCTCTTTT GAGATAAATA TGGAAACCAA AGCCGCTGAA
ATAGCATACA GCAACGGGCA TTACAGTTTT GTGGTACAGG ATGTTTCGAC CTATCCGGTG
GCAGCTTCTT TGTCTCCCGA AGCAATCGTT TCTATCGTTC CGGCGGAAGC CTTGCTCAGT
GGCCTTTCGG CTACGCTCTT TGCTACCAGT CAGGACGAAC GCCGGCCGAT CATGACAGGG
GTCTATCTGG ATTTCTTCGA GGACAAGCTT GTTTTCGTAG GCTCGGATGG ACAGATCTTG
GTGAAGCAGG AGGATGCTAA TGTGCAGAGC CGTCGGCGTA GTGCCTTCTG CCTGCCTAGG
AAAGCCTGTC TTCTGCTGCG CAATGTTCTG CCCCGACTGG AAGGCGATGT GACACTCACG
TATGACAGCA ACTATCTCCA TATAGAACTT GGCAATTATA CGCTCAGAGC ACGGTTGCTG
GAAGGTCGTT ATCCGAATTA TAATAGTGTA ATACCTACCA GCAATCCTTT CTCGGTGAAA
GTGGATCGTG CTCAACTCCT ATCCGGAGCC AAGCGCGTAT CTATCTTCTC CAATCCGGCT
ACGAGTATGC TGCGCATGGA GTTTACCCCT GCAGGCATCC GCTTATCGGC TAATGATATA
GATTTCTCTG TGGCTGCTGA AGAACATGTG CCGGCAGAAT GTCCGGCCGA CATCAACATG
CGCATCGGAT TCAAGTCGGA TGTCTTTCAG ACAATTCTGC AAGGAATGCC ATCGGAAGAA
GTGATAATGA CTTTGGCTGA TCAGACTCGT GCCGGTCTCA TACTGCCGGC AGAGAATGCA
CCGGGGATAA GCCTGTGCAA TTTGCTTTTG CCGATGAAGT TGATCGGCGA ATAA
 
Protein sequence
MKFEVASNVL LQHLQLIARV IASRSTLPIL ESVLFELEGD QLRLTAADMA NRMSTELTVN 
NVGGENGSFA VPERILLEPL KELPDQPISF EINMETKAAE IAYSNGHYSF VVQDVSTYPV
AASLSPEAIV SIVPAEALLS GLSATLFATS QDERRPIMTG VYLDFFEDKL VFVGSDGQIL
VKQEDANVQS RRRSAFCLPR KACLLLRNVL PRLEGDVTLT YDSNYLHIEL GNYTLRARLL
EGRYPNYNSV IPTSNPFSVK VDRAQLLSGA KRVSIFSNPA TSMLRMEFTP AGIRLSANDI
DFSVAAEEHV PAECPADINM RIGFKSDVFQ TILQGMPSEE VIMTLADQTR AGLILPAENA
PGISLCNLLL PMKLIGE